Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PPM30_RS19250 Genome accession   NZ_CP116868
Coordinates   3698403..3699197 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis subsp. subtilis strain MGP003     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3693403..3704197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM30_RS19225 rocD 3693853..3695058 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  PPM30_RS19230 rocR 3695299..3696684 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  PPM30_RS19235 - 3696666..3696854 (-) 189 Protein_3734 ATP-binding protein -
  PPM30_RS19240 - 3696971..3697099 (-) 129 WP_003242634.1 hypothetical protein -
  PPM30_RS19245 htrA 3697119..3698321 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  PPM30_RS19250 vicX 3698403..3699197 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  PPM30_RS19255 walI 3699219..3700061 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  PPM30_RS19260 walH 3700048..3701415 (-) 1368 WP_064635423.1 WalRK two-component regulatory system regulator WalH -
  PPM30_RS19265 walK 3701405..3703240 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  PPM30_RS19270 walR 3703248..3703955 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=713614 PPM30_RS19250 WP_003242676.1 3698403..3699197(-) (vicX) [Bacillus subtilis subsp. subtilis strain MGP003]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=713614 PPM30_RS19250 WP_003242676.1 3698403..3699197(-) (vicX) [Bacillus subtilis subsp. subtilis strain MGP003]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53