Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PPM66_RS13750 Genome accession   NZ_CP116867
Coordinates   2620494..2621204 (-) Length   236 a.a.
NCBI ID   WP_003229230.1    Uniprot ID   O34977
Organism   Bacillus subtilis subsp. subtilis strain MGP008     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2615494..2626204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM66_RS13730 cysK 2615545..2616480 (+) 936 WP_003229237.1 cysteine synthase A -
  PPM66_RS13735 pepV 2616514..2617905 (-) 1392 WP_004399126.1 dipeptidase PepV -
  PPM66_RS13740 pbuO 2618002..2619300 (+) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  PPM66_RS13745 ythQ 2619340..2620497 (-) 1158 WP_003229232.1 ABC transporter permease -
  PPM66_RS13750 pptA 2620494..2621204 (-) 711 WP_003229230.1 ABC transporter ATP-binding protein Regulator
  PPM66_RS13755 ytzE 2621495..2621716 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  PPM66_RS13760 rsuA 2621837..2622556 (-) 720 WP_003229226.1 pseudouridine synthase -
  PPM66_RS13765 murJ 2622625..2624259 (-) 1635 WP_003229224.1 lipid II flippase MurJ -
  PPM66_RS13770 ytfP 2624461..2625723 (+) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26506.56 Da        Isoelectric Point: 5.3508

>NTDB_id=713438 PPM66_RS13750 WP_003229230.1 2620494..2621204(-) (pptA) [Bacillus subtilis subsp. subtilis strain MGP008]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=713438 PPM66_RS13750 WP_003229230.1 2620494..2621204(-) (pptA) [Bacillus subtilis subsp. subtilis strain MGP008]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCAGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTTCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATGTTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432