Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NP445_RS11120 Genome accession   NZ_CP101938
Coordinates   2169549..2170352 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain BDGP7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2164549..2175352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP445_RS11105 (NP445_11105) - 2166765..2167001 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  NP445_RS11110 (NP445_11110) - 2167035..2167772 (-) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  NP445_RS11115 (NP445_11115) - 2167999..2169099 (-) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  NP445_RS11120 (NP445_11120) spo0A 2169549..2170352 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NP445_RS11125 (NP445_11125) spoIVB 2170636..2171913 (-) 1278 WP_008342225.1 SpoIVB peptidase -
  NP445_RS11130 (NP445_11130) recN 2172112..2173845 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  NP445_RS11135 (NP445_11135) ahrC 2173880..2174329 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  NP445_RS11140 (NP445_11140) - 2174491..2175345 (-) 855 WP_024718867.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=713395 NP445_RS11120 WP_008342226.1 2169549..2170352(-) (spo0A) [Bacillus altitudinis strain BDGP7]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=713395 NP445_RS11120 WP_008342226.1 2169549..2170352(-) (spo0A) [Bacillus altitudinis strain BDGP7]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACGAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884