Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NP445_RS05700 Genome accession   NZ_CP101938
Coordinates   1131832..1132029 (+) Length   65 a.a.
NCBI ID   WP_024720057.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BDGP7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1126832..1137029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP445_RS05670 (NP445_05670) - 1127232..1127411 (+) 180 WP_008348517.1 YjzC family protein -
  NP445_RS05675 (NP445_05675) - 1127581..1128846 (+) 1266 WP_007499050.1 MFS transporter -
  NP445_RS05680 (NP445_05680) - 1128966..1129160 (-) 195 WP_024720055.1 YjzD family protein -
  NP445_RS05685 (NP445_05685) - 1129373..1130113 (+) 741 WP_256689168.1 hypothetical protein -
  NP445_RS05690 (NP445_05690) - 1130189..1130764 (+) 576 WP_039167361.1 hypothetical protein -
  NP445_RS05695 (NP445_05695) med 1130855..1131820 (+) 966 WP_256689169.1 BMP family ABC transporter substrate-binding protein Regulator
  NP445_RS05700 (NP445_05700) comZ 1131832..1132029 (+) 198 WP_024720057.1 ComZ family protein Regulator
  NP445_RS05705 (NP445_05705) - 1132041..1132274 (-) 234 WP_008348506.1 hypothetical protein -
  NP445_RS05710 (NP445_05710) - 1132444..1133382 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  NP445_RS05715 (NP445_05715) fabF 1133404..1134645 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  NP445_RS05720 (NP445_05720) - 1134723..1135517 (+) 795 WP_256689170.1 DUF2268 domain-containing protein -
  NP445_RS05725 (NP445_05725) - 1135688..1136668 (+) 981 WP_178897168.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7319.36 Da        Isoelectric Point: 4.2259

>NTDB_id=713378 NP445_RS05700 WP_024720057.1 1131832..1132029(+) (comZ) [Bacillus altitudinis strain BDGP7]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=713378 NP445_RS05700 WP_024720057.1 1131832..1132029(+) (comZ) [Bacillus altitudinis strain BDGP7]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677