Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NP445_RS05320 Genome accession   NZ_CP101938
Coordinates   1050164..1051114 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain BDGP7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1045164..1056114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP445_RS05300 (NP445_05300) - 1046401..1046883 (+) 483 WP_008348662.1 hypothetical protein -
  NP445_RS05305 (NP445_05305) - 1046914..1048353 (-) 1440 WP_186365893.1 PLP-dependent aminotransferase family protein -
  NP445_RS05310 (NP445_05310) - 1048497..1049666 (+) 1170 WP_024720010.1 MFS transporter -
  NP445_RS05315 (NP445_05315) - 1049729..1050007 (+) 279 WP_024720011.1 barstar family protein -
  NP445_RS05320 (NP445_05320) ceuB 1050164..1051114 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  NP445_RS05325 (NP445_05325) - 1051107..1052057 (+) 951 WP_024720012.1 iron chelate uptake ABC transporter family permease subunit -
  NP445_RS05330 (NP445_05330) - 1052048..1052806 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  NP445_RS05335 (NP445_05335) - 1052829..1053773 (+) 945 WP_045034716.1 siderophore ABC transporter substrate-binding protein -
  NP445_RS05340 (NP445_05340) - 1054110..1055066 (+) 957 WP_256689154.1 LCP family protein -
  NP445_RS05345 (NP445_05345) - 1055101..1055535 (-) 435 WP_039167431.1 hypothetical protein -
  NP445_RS05350 (NP445_05350) - 1055621..1055983 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=713374 NP445_RS05320 WP_017366964.1 1050164..1051114(+) (ceuB) [Bacillus altitudinis strain BDGP7]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=713374 NP445_RS05320 WP_017366964.1 1050164..1051114(+) (ceuB) [Bacillus altitudinis strain BDGP7]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCACTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494