Detailed information NTG0713358

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NP435_RS19745
• Genome accession: NZ_CP101937
• Coordinates: 3777161..3778306 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain RUB331
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3772161..3783306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP435_RS19725 (NP435_19725)	albF	3772177..3773457 (+)	1281	WP_003242974.1	pitrilysin family protein	-
NP435_RS19730 (NP435_19730)	albG	3773454..3774155 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NP435_RS19735 (NP435_19735)	ywhL	3774161..3775537 (-)	1377	WP_003244415.1	YncE family protein	-
NP435_RS19740 (NP435_19740)	ywhK	3775576..3776931 (-)	1356	WP_003227552.1	YncE family protein	-
NP435_RS21700	-	3776928..3777158 (-)	231	WP_009968328.1	hypothetical protein	-
NP435_RS19745 (NP435_19745)	rapF	3777161..3778306 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
NP435_RS19750 (NP435_19750)	phrF	3778290..3778409 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NP435_RS19755 (NP435_19755)	ywhH	3778508..3778981 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
NP435_RS19760 (NP435_19760)	speB	3779013..3779885 (-)	873	WP_003227545.1	agmatinase	-
NP435_RS19765 (NP435_19765)	speE	3779946..3780776 (-)	831	WP_003227543.1	spermidine synthase	-
NP435_RS19770 (NP435_19770)	pbpG	3780978..3783053 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=713358 NP435_RS19745 WP_003227549.1 3777161..3778306(+) (rapF) [Bacillus subtilis strain RUB331]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=713358 NP435_RS19745 WP_003227549.1 3777161..3778306(+) (rapF) [Bacillus subtilis strain RUB331]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572