Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NP435_RS04600 Genome accession   NZ_CP101937
Coordinates   904613..905407 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain RUB331     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 899613..910407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP435_RS04570 (NP435_04570) sxzA 900452..901483 (+) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -
  NP435_RS04575 (NP435_04575) yfhB 901598..902479 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NP435_RS04580 (NP435_04580) yfhC 902567..903151 (+) 585 WP_003243940.1 nitroreductase -
  NP435_RS04585 (NP435_04585) yfhD 903190..903381 (-) 192 WP_003233561.1 YfhD family protein -
  NP435_RS04590 (NP435_04590) yfhE 903448..903558 (-) 111 WP_003223230.1 YfhE family protein -
  NP435_RS04595 (NP435_04595) yfhF 903613..904524 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  NP435_RS04600 (NP435_04600) recX 904613..905407 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  NP435_RS04605 (NP435_04605) yfhH 905409..905723 (+) 315 WP_003244592.1 YfhH family protein -
  NP435_RS04610 (NP435_04610) yfhI 905866..907059 (+) 1194 WP_003243500.1 MFS transporter -
  NP435_RS04615 (NP435_04615) sspK 907092..907244 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NP435_RS04620 (NP435_04620) yfhJ 907369..907638 (+) 270 WP_003243789.1 YfhJ family protein -
  NP435_RS04625 (NP435_04625) yfhK 907783..908301 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  NP435_RS04630 (NP435_04630) spdL 908386..908718 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NP435_RS04635 (NP435_04635) ephM 908705..909565 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=713295 NP435_RS04600 WP_003243354.1 904613..905407(+) (recX) [Bacillus subtilis strain RUB331]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=713295 NP435_RS04600 WP_003243354.1 904613..905407(+) (recX) [Bacillus subtilis strain RUB331]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1