Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NP434_RS07630 Genome accession   NZ_CP101936
Coordinates   1446872..1447336 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain BGSC 10A5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441872..1452336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP434_RS07610 (NP434_07610) kinA 1442339..1444159 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  NP434_RS07615 (NP434_07615) dapX 1444169..1445350 (-) 1182 WP_121591741.1 aminotransferase A -
  NP434_RS07620 (NP434_07620) - 1445552..1445713 (-) 162 WP_003245246.1 hypothetical protein -
  NP434_RS07625 (NP434_07625) cheV 1445917..1446828 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  NP434_RS07630 (NP434_07630) kre 1446872..1447336 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NP434_RS07635 (NP434_07635) ykuC 1447462..1448754 (-) 1293 WP_014479656.1 MFS transporter -
  NP434_RS07640 (NP434_07640) ltdD 1448830..1449324 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  NP434_RS07645 (NP434_07645) ppeE 1449381..1450241 (-) 861 WP_256683404.1 metallophosphoesterase -
  NP434_RS07650 (NP434_07650) fadH 1450384..1451148 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=713228 NP434_RS07630 WP_003232406.1 1446872..1447336(-) (kre) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=713228 NP434_RS07630 WP_003232406.1 1446872..1447336(-) (kre) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAACCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1