Detailed information NTG0713141

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NP436_RS06255
• Genome accession: NZ_CP101932
• Coordinates: 1204975..1205928 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain BGSC 27E1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1199975..1210928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP436_RS06225 (NP436_06225)	argF	1200517..1201476 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
NP436_RS06235 (NP436_06235)	yjzC	1202852..1203031 (+)	180	WP_003245356.1	YjzC family protein	-
NP436_RS06240 (NP436_06240)	yjzD	1203077..1203262 (-)	186	WP_003245236.1	YjzD family protein	-
NP436_RS06245 (NP436_06245)	-	1203511..1204245 (+)	735	WP_014479433.1	hypothetical protein	-
NP436_RS06250 (NP436_06250)	-	1204327..1204884 (+)	558	WP_014479435.1	hypothetical protein	-
NP436_RS06255 (NP436_06255)	med	1204975..1205928 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
NP436_RS06260 (NP436_06260)	comZ	1205943..1206134 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
NP436_RS06265 (NP436_06265)	yjzB	1206164..1206391 (-)	228	WP_031600361.1	spore coat protein YjzB	-
NP436_RS06270 (NP436_06270)	fabH	1206556..1207494 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
NP436_RS06275 (NP436_06275)	fabF	1207517..1208758 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
NP436_RS06280 (NP436_06280)	yjaZ	1208834..1209619 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
NP436_RS06285 (NP436_06285)	appD	1209811..1210797 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=713141 NP436_RS06255 WP_014479436.1 1204975..1205928(+) (med) [Bacillus subtilis subsp. natto strain BGSC 27E1]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=713141 NP436_RS06255 WP_014479436.1 1204975..1205928(+) (med) [Bacillus subtilis subsp. natto strain BGSC 27E1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994