Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NP436_RS04655 Genome accession   NZ_CP101932
Coordinates   909458..910252 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain BGSC 27E1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 904458..915252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP436_RS04625 (NP436_04625) sxzA 905298..906329 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NP436_RS04630 (NP436_04630) yfhB 906444..907325 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  NP436_RS04635 (NP436_04635) yfhC 907413..907997 (+) 585 WP_033881364.1 nitroreductase -
  NP436_RS04640 (NP436_04640) yfhD 908036..908227 (-) 192 WP_014479215.1 YfhD family protein -
  NP436_RS04645 (NP436_04645) yfhE 908293..908403 (-) 111 WP_003223230.1 YfhE family protein -
  NP436_RS04650 (NP436_04650) yfhF 908458..909369 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  NP436_RS04655 (NP436_04655) recX 909458..910252 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  NP436_RS04660 (NP436_04660) yfhH 910254..910568 (+) 315 WP_003244592.1 YfhH family protein -
  NP436_RS04665 (NP436_04665) yfhI 910711..911904 (+) 1194 WP_003243500.1 MFS transporter -
  NP436_RS04670 (NP436_04670) sspK 911936..912088 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NP436_RS04675 (NP436_04675) yfhJ 912213..912482 (+) 270 WP_003243789.1 YfhJ family protein -
  NP436_RS04680 (NP436_04680) yfhK 912627..913145 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  NP436_RS04685 (NP436_04685) spdL 913230..913562 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  NP436_RS04690 (NP436_04690) ephM 913549..914409 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=713134 NP436_RS04655 WP_014479217.1 909458..910252(+) (recX) [Bacillus subtilis subsp. natto strain BGSC 27E1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=713134 NP436_RS04655 WP_014479217.1 909458..910252(+) (recX) [Bacillus subtilis subsp. natto strain BGSC 27E1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992