Detailed information NTG0713080

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: PNF29_RS18575
• Genome accession: NZ_CP116773
• Coordinates: 3511210..3512385 (-)
• Length: 391 a.a.
• NCBI ID: WP_272515702.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM125727
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3506210..3517385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF29_RS18550 (PNF29_18550)	-	3506259..3506711 (+)	453	WP_017696995.1	SMI1/KNR4 family protein	-
PNF29_RS18555 (PNF29_18555)	-	3506929..3507492 (+)	564	WP_017696997.1	GNAT family N-acetyltransferase	-
PNF29_RS18560 (PNF29_18560)	-	3508031..3508450 (-)	420	WP_072182069.1	universal stress protein	-
PNF29_RS18565 (PNF29_18565)	-	3508468..3509934 (-)	1467	WP_272515700.1	SulP family inorganic anion transporter	-
PNF29_RS18570 (PNF29_18570)	-	3510152..3510709 (+)	558	WP_272515701.1	recombinase family protein	-
PNF29_RS18575 (PNF29_18575)	rapC	3511210..3512385 (-)	1176	WP_272515702.1	Rap family tetratricopeptide repeat protein	Regulator
PNF29_RS18580 (PNF29_18580)	-	3512758..3513192 (+)	435	WP_208556340.1	hypothetical protein	-
PNF29_RS18585 (PNF29_18585)	-	3513213..3514724 (+)	1512	WP_272515704.1	hypothetical protein	-
PNF29_RS18590 (PNF29_18590)	conJ	3514835..3515215 (-)	381	WP_243572602.1	DUF4467 domain-containing protein	-
PNF29_RS18595 (PNF29_18595)	-	3515278..3515784 (-)	507	WP_080624172.1	hypothetical protein	-
PNF29_RS18600 (PNF29_18600)	cwlT	3515799..3516788 (-)	990	WP_272515705.1	bifunctional lytic transglycosylase/C40 family peptidase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46485.61 Da
• Isoelectric Point: 4.7209

>NTDB_id=713080 PNF29_RS18575 WP_272515702.1 3511210..3512385(-) (rapC) [Bacillus subtilis strain SRCM125727]
MRSVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEKAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMESKEIDD
LNSAYETIKEIEEQGQLTGMLEYYYYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTLRCQFIVAGNYIDSLEYEKALQVFFESLEIAKEINIDHLIGMSHINIGICFDELEEY
TKASRHLELSLEYLEKFNNSFVSKALFILTHVKAKQKNFNLACEYFKKGKMYSNKNNDNEYAAKFKILEGLYFSNGEYHH
IEDAFTYLESKKMYADVENYAIEVGDYFHQTGDLVLSNQYYRLSIEARQKIKKGEIINENHSDSVGSAGIE

Nucleotide

• Length: 1176 bp

>NTDB_id=713080 PNF29_RS18575 WP_272515702.1 3511210..3512385(-) (rapC) [Bacillus subtilis strain SRCM125727]
TTGCGGAGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACCTAGTTACAAAAAAGTTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTACTAAACATGGAAGAAAACCAAG
ATGCATTGTTATATTATCAGCTATTGGAATTTAGGCACGAGATAATGTTGAGTTATATGGAATCAAAGGAAATAGATGAT
CTGAACAGTGCTTATGAAACCATAAAAGAGATTGAAGAGCAAGGCCAATTAACCGGAATGCTGGAATACTATTATTATTT
TTTTAAAGGTATGTATGAATTTAGGCGTAAAGAATTGACTACGGCCATAAGCGCCTATCGAATAGCAGAATCAAAGTTGT
CGGAAGTAGAGGACGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTGTATTATTATATGAAACAAACGTAT
TTCTCCATGAATTATGCAAATCGTGCGCTAAAAATATTTAGAGAGTATGAGGAATATGCTGTTCAAACGTTACGCTGTCA
ATTCATTGTTGCCGGAAATTATATTGATTCATTAGAATATGAGAAGGCATTACAAGTTTTTTTTGAATCATTGGAGATAG
CAAAAGAAATAAATATTGATCATTTAATTGGAATGTCCCATATAAATATCGGTATATGTTTTGATGAATTGGAGGAATAT
ACAAAGGCATCTCGTCACTTGGAATTGTCTTTAGAGTATTTAGAAAAATTCAATAATTCTTTTGTGTCGAAAGCTCTATT
TATTTTGACACATGTCAAAGCAAAACAGAAGAACTTTAATTTGGCTTGTGAATATTTTAAGAAAGGGAAAATGTACAGTA
ATAAAAATAATGATAATGAATACGCGGCGAAATTCAAAATATTAGAAGGACTTTACTTTTCAAATGGTGAATATCATCAT
ATTGAAGATGCTTTTACTTATCTAGAATCAAAAAAAATGTATGCTGATGTTGAGAATTACGCCATAGAAGTTGGGGATTA
CTTTCACCAAACGGGCGATTTGGTGCTTTCAAACCAATATTATCGTTTAAGCATTGAAGCCAGACAAAAAATAAAAAAAG
GAGAGATTATCAATGAAAATCACTCGGACTCTGTTGGCAGTGCTGGTATTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	38.462	96.419	0.371
rapF	Bacillus subtilis subsp. subtilis str. 168	39.286	93.095	0.366