Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   NP432_RS07850 Genome accession   NZ_CP101931
Coordinates   1486791..1487069 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus subtilis strain BGSC b98af     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1481791..1492069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP432_RS07830 (NP432_07830) panEB 1482979..1483890 (+) 912 WP_137200747.1 ketopantoate reductase family protein -
  NP432_RS07835 (NP432_07835) ampS 1483924..1485156 (-) 1233 WP_024572116.1 aminopeptidase -
  NP432_RS07840 (NP432_07840) ykpC 1485265..1485399 (-) 135 WP_003238865.1 protein YkpC -
  NP432_RS07845 (NP432_07845) mreBH 1485500..1486507 (-) 1008 WP_024572115.1 cell shape-determining protein MreBH -
  NP432_RS07850 (NP432_07850) abrB 1486791..1487069 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  NP432_RS07855 (NP432_07855) kinC 1487259..1488545 (+) 1287 WP_003232333.1 two-component sensor histidine kinase KinC -
  NP432_RS07860 (NP432_07860) ykqA 1488561..1489388 (+) 828 WP_256683409.1 gamma-glutamylcyclotransferase -
  NP432_RS07865 (NP432_07865) ktrC 1489451..1490116 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  NP432_RS07870 (NP432_07870) ade 1490272..1492005 (+) 1734 WP_227057429.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=713074 NP432_RS07850 WP_003244728.1 1486791..1487069(+) (abrB) [Bacillus subtilis strain BGSC b98af]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=713074 NP432_RS07850 WP_003244728.1 1486791..1487069(+) (abrB) [Bacillus subtilis strain BGSC b98af]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576