Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NP432_RS04590 Genome accession   NZ_CP101931
Coordinates   891594..892388 (+) Length   264 a.a.
NCBI ID   WP_256683309.1    Uniprot ID   -
Organism   Bacillus subtilis strain BGSC b98af     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 886594..897388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP432_RS04560 (NP432_04560) sxzA 887434..888465 (+) 1032 WP_029317459.1 iron chelate uptake ABC transporter family permease subunit -
  NP432_RS04565 (NP432_04565) yfhB 888580..889461 (+) 882 WP_063335720.1 PhzF family phenazine biosynthesis protein -
  NP432_RS04570 (NP432_04570) yfhC 889549..890133 (+) 585 WP_122895253.1 nitroreductase -
  NP432_RS04575 (NP432_04575) yfhD 890172..890363 (-) 192 WP_014479215.1 YfhD family protein -
  NP432_RS04580 (NP432_04580) yfhE 890429..890539 (-) 111 WP_003223230.1 YfhE family protein -
  NP432_RS04585 (NP432_04585) yfhF 890594..891505 (-) 912 WP_210216601.1 TIGR01777 family oxidoreductase -
  NP432_RS04590 (NP432_04590) recX 891594..892388 (+) 795 WP_256683309.1 recombination regulator RecX Regulator
  NP432_RS04595 (NP432_04595) yfhH 892390..892704 (+) 315 WP_003244592.1 YfhH family protein -
  NP432_RS04600 (NP432_04600) yfhI 892847..894040 (+) 1194 WP_003243500.1 MFS transporter -
  NP432_RS04605 (NP432_04605) sspK 894072..894224 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NP432_RS04610 (NP432_04610) yfhJ 894349..894618 (+) 270 WP_003243789.1 YfhJ family protein -
  NP432_RS04615 (NP432_04615) yfhK 894763..895281 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  NP432_RS04620 (NP432_04620) spdL 895366..895698 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  NP432_RS04625 (NP432_04625) ephM 895685..896545 (+) 861 WP_256683310.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30986.21 Da        Isoelectric Point: 6.6686

>NTDB_id=713056 NP432_RS04590 WP_256683309.1 891594..892388(+) (recX) [Bacillus subtilis strain BGSC b98af]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFSRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=713056 NP432_RS04590 WP_256683309.1 891594..892388(+) (recX) [Bacillus subtilis strain BGSC b98af]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAGCCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTGAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996