Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NP432_RS02085 Genome accession   NZ_CP101931
Coordinates   378698..379096 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain BGSC b98af     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 373698..384096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP432_RS02050 (NP432_02050) - 374561..374758 (+) 198 Protein_361 hypothetical protein -
  NP432_RS02055 (NP432_02055) - 374795..375115 (+) 321 Protein_362 RDD family protein -
  NP432_RS02060 (NP432_02060) yckD 375197..375529 (+) 333 WP_256683196.1 YckD family protein -
  NP432_RS02065 (NP432_02065) - 375657..376079 (+) 423 WP_174616579.1 MarR family winged helix-turn-helix transcriptional regulator -
  NP432_RS02070 (NP432_02070) - 376067..376408 (+) 342 WP_032724911.1 DUF3147 family protein -
  NP432_RS02075 (NP432_02075) - 376427..377155 (+) 729 WP_174223466.1 AAA family ATPase -
  NP432_RS02080 (NP432_02080) bglC 377228..378661 (+) 1434 WP_097080589.1 6-phospho-beta-glucosidase -
  NP432_RS02085 (NP432_02085) nin/comJ 378698..379096 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  NP432_RS02090 (NP432_02090) nucA/comI 379123..379572 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  NP432_RS02095 (NP432_02095) tlpC 379740..381461 (-) 1722 WP_076458400.1 methyl-accepting chemotaxis protein TlpC -
  NP432_RS02100 (NP432_02100) hxlB 381572..382129 (-) 558 WP_144483821.1 6-phospho-3-hexuloisomerase -
  NP432_RS02105 (NP432_02105) hxlA 382135..382767 (-) 633 WP_032724921.1 3-hexulose-6-phosphate synthase -
  NP432_RS02110 (NP432_02110) hxlR 382999..383361 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=713049 NP432_RS02085 WP_015715226.1 378698..379096(-) (nin/comJ) [Bacillus subtilis strain BGSC b98af]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=713049 NP432_RS02085 WP_015715226.1 378698..379096(-) (nin/comJ) [Bacillus subtilis strain BGSC b98af]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGTTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985