Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NP433_RS12325 | Genome accession | NZ_CP101930 |
| Coordinates | 2425853..2426890 (-) | Length | 345 a.a. |
| NCBI ID | WP_116316545.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain BGSC 10A5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2420853..2431890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP433_RS12275 (NP433_12275) | tasA | 2420950..2421735 (-) | 786 | WP_212130175.1 | biofilm matrix protein TasA | - |
| NP433_RS12280 (NP433_12280) | sipW | 2421799..2422371 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| NP433_RS12285 (NP433_12285) | tapA | 2422355..2423116 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NP433_RS12290 (NP433_12290) | yqzG | 2423388..2423714 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NP433_RS12295 (NP433_12295) | spoIITA | 2423756..2423935 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| NP433_RS12300 (NP433_12300) | comGG | 2424007..2424381 (-) | 375 | WP_167408283.1 | ComG operon protein ComGG | Machinery gene |
| NP433_RS12305 (NP433_12305) | comGF | 2424382..2424765 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NP433_RS12310 (NP433_12310) | comGE | 2424791..2425138 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| NP433_RS12315 (NP433_12315) | comGD | 2425122..2425553 (-) | 432 | WP_256682874.1 | comG operon protein ComGD | Machinery gene |
| NP433_RS12320 (NP433_12320) | comGC | 2425543..2425839 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NP433_RS12325 (NP433_12325) | comGB | 2425853..2426890 (-) | 1038 | WP_116316545.1 | comG operon protein ComGB | Machinery gene |
| NP433_RS12330 (NP433_12330) | comGA | 2426877..2427947 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| NP433_RS12335 (NP433_12335) | corA | 2428359..2429312 (-) | 954 | WP_256682875.1 | magnesium transporter CorA | - |
| NP433_RS12340 (NP433_12340) | yqhB | 2429455..2430783 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| NP433_RS12345 (NP433_12345) | rsbRD | 2430836..2431672 (-) | 837 | WP_173614187.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39762.21 Da Isoelectric Point: 9.6257
>NTDB_id=713011 NP433_RS12325 WP_116316545.1 2425853..2426890(-) (comGB) [Bacillus subtilis strain BGSC 10A5]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGVPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGVPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=713011 NP433_RS12325 WP_116316545.1 2425853..2426890(-) (comGB) [Bacillus subtilis strain BGSC 10A5]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGTTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTAATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGTTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTAATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |