Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NP433_RS07730 Genome accession   NZ_CP101930
Coordinates   1462722..1463297 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain BGSC 10A5     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1457722..1468297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP433_RS07700 (NP433_07700) dapD 1457908..1458618 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NP433_RS07705 (NP433_07705) dapI 1458688..1459812 (+) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  NP433_RS07710 (NP433_07710) ykuS 1459874..1460119 (+) 246 WP_003232382.1 YkuS family protein -
  NP433_RS07715 (NP433_07715) mscT 1460156..1460959 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NP433_RS07720 (NP433_07720) ahpA 1461196..1461738 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NP433_RS07725 (NP433_07725) ykuV 1461810..1462256 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  NP433_RS07730 (NP433_07730) rok 1462722..1463297 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NP433_RS07735 (NP433_07735) cse15 1463338..1464303 (-) 966 WP_048654871.1 spore protein Cse15 -
  NP433_RS07740 (NP433_07740) mobA 1464440..1465039 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  NP433_RS07745 (NP433_07745) moeB 1465090..1466109 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  NP433_RS07750 (NP433_07750) glp 1466127..1467419 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  NP433_RS07755 (NP433_07755) mobB 1467380..1467901 (+) 522 WP_080529272.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=712995 NP433_RS07730 WP_003232378.1 1462722..1463297(+) (rok) [Bacillus subtilis strain BGSC 10A5]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=712995 NP433_RS07730 WP_003232378.1 1462722..1463297(+) (rok) [Bacillus subtilis strain BGSC 10A5]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1