Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PNF29_RS05930 Genome accession   NZ_CP116773
Coordinates   1141425..1142120 (+) Length   231 a.a.
NCBI ID   WP_017695455.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM125727     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136425..1147120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS05905 (PNF29_05905) ytrB 1136452..1137330 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  PNF29_RS05910 (PNF29_05910) ytrC 1137324..1138310 (+) 987 WP_017695452.1 ABC transporter permease YtrC -
  PNF29_RS05915 (PNF29_05915) ytrD 1138340..1139317 (+) 978 WP_017695453.1 ABC transporter permease YtrD -
  PNF29_RS05920 (PNF29_05920) ytrE 1139332..1140027 (+) 696 WP_272516033.1 ABC transporter ATP-binding protein YtrE -
  PNF29_RS05925 (PNF29_05925) ytrF 1140017..1141327 (+) 1311 WP_017695454.1 ABC transporter permease YtrF -
  PNF29_RS05930 (PNF29_05930) braR 1141425..1142120 (+) 696 WP_017695455.1 two-component response regulator BceR Regulator
  PNF29_RS05935 (PNF29_05935) bceS 1142113..1143117 (+) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  PNF29_RS05940 (PNF29_05940) bceA 1143219..1143980 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  PNF29_RS05945 (PNF29_05945) bceB 1143970..1145910 (+) 1941 WP_017695456.1 bacitracin ABC transporter permease BceB -
  PNF29_RS05950 (PNF29_05950) yttA 1145947..1146693 (-) 747 WP_017695457.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.80 Da        Isoelectric Point: 5.3775

>NTDB_id=712985 PNF29_RS05930 WP_017695455.1 1141425..1142120(+) (braR) [Bacillus subtilis strain SRCM125727]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFEVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=712985 PNF29_RS05930 WP_017695455.1 1141425..1142120(+) (braR) [Bacillus subtilis strain SRCM125727]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCACTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGAAGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGTG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377