Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NP433_RS06125 Genome accession   NZ_CP101930
Coordinates   1176972..1177925 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain BGSC 10A5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1171972..1182925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP433_RS06100 (NP433_06100) argF 1173805..1174764 (+) 960 WP_088325579.1 ornithine carbamoyltransferase -
  NP433_RS06105 (NP433_06105) yjzC 1174850..1175029 (+) 180 WP_003245356.1 YjzC family protein -
  NP433_RS06110 (NP433_06110) yjzD 1175075..1175260 (-) 186 WP_003245236.1 YjzD family protein -
  NP433_RS06115 (NP433_06115) - 1175509..1176243 (+) 735 WP_003245223.1 hypothetical protein -
  NP433_RS06120 (NP433_06120) - 1176325..1176882 (+) 558 WP_015252365.1 hypothetical protein -
  NP433_RS06125 (NP433_06125) med 1176972..1177925 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NP433_RS06130 (NP433_06130) comZ 1177940..1178131 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NP433_RS06135 (NP433_06135) yjzB 1178161..1178400 (-) 240 WP_003232972.1 spore coat protein YjzB -
  NP433_RS06140 (NP433_06140) fabH 1178565..1179503 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NP433_RS06145 (NP433_06145) fabF 1179526..1180767 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NP433_RS06150 (NP433_06150) yjaZ 1180843..1181628 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  NP433_RS06155 (NP433_06155) appD 1181820..1182806 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=712985 NP433_RS06125 WP_014476425.1 1176972..1177925(+) (med) [Bacillus subtilis strain BGSC 10A5]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=712985 NP433_RS06125 WP_014476425.1 1176972..1177925(+) (med) [Bacillus subtilis strain BGSC 10A5]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTATGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997