Detailed information    

insolico Bioinformatically predicted

Overview


Name   yaaT   Type   Regulator
Locus tag   PND17_RS07770 Genome accession   NZ_CP116772
Coordinates   1475422..1476228 (-) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain strain TSGB 4141     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context


Location: 1470422..1481228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PND17_RS07735 (PND17_07735) - 1470433..1470904 (+) 472 Protein_1508 YgjV family protein -
  PND17_RS07740 (PND17_07740) - 1470923..1471744 (-) 822 WP_271298429.1 Cof-type HAD-IIB family hydrolase -
  PND17_RS07745 (PND17_07745) - 1471767..1472423 (-) 657 WP_087009737.1 glycoside hydrolase family 73 protein -
  PND17_RS07750 (PND17_07750) - 1472521..1472862 (-) 342 WP_271298532.1 P-II family nitrogen regulator -
  PND17_RS07755 (PND17_07755) - 1472873..1474108 (-) 1236 WP_087009736.1 ammonium transporter -
  PND17_RS07760 (PND17_07760) rsmI 1474246..1475112 (-) 867 WP_271298428.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  PND17_RS07765 (PND17_07765) yabA 1475115..1475435 (-) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  PND17_RS07770 (PND17_07770) yaaT 1475422..1476228 (-) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  PND17_RS07775 (PND17_07775) - 1476225..1477100 (-) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  PND17_RS07780 (PND17_07780) tmk 1477109..1477738 (-) 630 WP_002946312.1 dTMP kinase -
  PND17_RS07785 (PND17_07785) tpiA 1477976..1478734 (-) 759 WP_002946314.1 triose-phosphate isomerase -
  PND17_RS07790 (PND17_07790) - 1478956..1479087 (+) 132 Protein_1519 peptide ABC transporter ATP-binding protein -
  PND17_RS07795 (PND17_07795) - 1479137..1479922 (-) 786 WP_271298430.1 ABC transporter permease -
  PND17_RS07800 (PND17_07800) - 1479934..1480632 (-) 699 WP_271298431.1 ABC transporter ATP-binding protein -
  PND17_RS07805 (PND17_07805) - 1480637..1481014 (-) 378 WP_011226300.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=712932 PND17_RS07770 WP_011680838.1 1475422..1476228(-) (yaaT) [Streptococcus thermophilus strain strain TSGB 4141]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=712932 PND17_RS07770 WP_011680838.1 1475422..1476228(-) (yaaT) [Streptococcus thermophilus strain strain TSGB 4141]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGTTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains


Predicted by InterProScan.

(61-145)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414