Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   PND17_RS02540 Genome accession   NZ_CP116772
Coordinates   485290..485772 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain strain TSGB 4141     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 480290..490772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PND17_RS02520 (PND17_02520) pepT 480771..481994 (-) 1224 WP_271298204.1 peptidase T -
  PND17_RS02525 (PND17_02525) lepB 482202..482759 (-) 558 WP_002953084.1 signal peptidase I -
  PND17_RS02530 (PND17_02530) - 482882..484111 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  PND17_RS02535 (PND17_02535) - 484101..485279 (-) 1179 WP_271298203.1 AI-2E family transporter -
  PND17_RS02540 (PND17_02540) mutX 485290..485772 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  PND17_RS02545 (PND17_02545) ftsX 485928..486857 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  PND17_RS02550 (PND17_02550) ftsE 486850..487542 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  PND17_RS02560 (PND17_02560) queG 488781..489899 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=712880 PND17_RS02540 WP_011226072.1 485290..485772(-) (mutX) [Streptococcus thermophilus strain strain TSGB 4141]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=712880 PND17_RS02540 WP_011226072.1 485290..485772(-) (mutX) [Streptococcus thermophilus strain strain TSGB 4141]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706