Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | K6J73_RS00275 | Genome accession | NZ_AP018780 |
| Coordinates | 56971..57483 (-) | Length | 170 a.a. |
| NCBI ID | WP_005651545.1 | Uniprot ID | A0A0H3PJN2 |
| Organism | Haemophilus influenzae strain CHBN-IV-1 isolate 13H36 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 51971..62483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J73_RS00260 (CHBNIV1_00520) | comQ | 55277..55564 (-) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| K6J73_RS00265 (CHBNIV1_00530) | comP | 55557..56240 (-) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| K6J73_RS00270 (CHBNIV1_00540) | comO | 56255..56971 (-) | 717 | WP_005651546.1 | type II secretion system protein J | Machinery gene |
| K6J73_RS00275 (CHBNIV1_00550) | comN | 56971..57483 (-) | 513 | WP_005651545.1 | type II secretion system protein | Machinery gene |
| K6J73_RS00280 (CHBNIV1_00560) | suhB | 57683..58486 (+) | 804 | WP_005664157.1 | inositol-1-monophosphatase | - |
| K6J73_RS00285 (CHBNIV1_00570) | nrfE | 58595..60502 (+) | 1908 | WP_110439959.1 | heme lyase NrfEFG subunit NrfE | - |
| K6J73_RS00290 (CHBNIV1_00580) | - | 60502..61032 (+) | 531 | WP_005664151.1 | DsbE family thiol:disulfide interchange protein | - |
| K6J73_RS00295 (CHBNIV1_00590) | nrfF | 61029..62183 (+) | 1155 | WP_221253151.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19877.15 Da Isoelectric Point: 8.9743
>NTDB_id=71267 K6J73_RS00275 WP_005651545.1 56971..57483(-) (comN) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=71267 K6J73_RS00275 WP_005651545.1 56971..57483(-) (comN) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCCGTGCCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTATTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTCTACAAGCGGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCCGTGCCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTATTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTCTACAAGCGGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |