Detailed information NTG0712636

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: NP431_RS11865
• Genome accession: NZ_CP101905
• Coordinates: 2593578..2596964 (+)
• Length: 1128 a.a.
• NCBI ID: WP_020333918.1
• Uniprot ID: A0AAN1CWN0
• Organism: Vibrio natriegens strain 14048
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2588578..2601964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP431_RS11840 (NP431_11840)	erpA	2588945..2589286 (-)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-
NP431_RS11845 (NP431_11845)	hemL	2589529..2590824 (+)	1296	WP_014232904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
NP431_RS11850 (NP431_11850)	-	2591164..2592249 (+)	1086	WP_014232906.1	AI-2E family transporter	-
NP431_RS11855 (NP431_11855)	rsmC	2592326..2593351 (+)	1026	WP_020333917.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
NP431_RS11860 (NP431_11860)	-	2593325..2593579 (-)	255	WP_024372754.1	hypothetical protein	-
NP431_RS11865 (NP431_11865)	chiS	2593578..2596964 (+)	3387	WP_020333918.1	response regulator	Regulator
NP431_RS11870 (NP431_11870)	-	2597840..2599522 (+)	1683	WP_014232909.1	ABC transporter substrate-binding protein	-
NP431_RS11875 (NP431_11875)	-	2599694..2600680 (+)	987	WP_014232910.1	ABC transporter permease	-
NP431_RS11880 (NP431_11880)	-	2600683..2601708 (+)	1026	WP_014232911.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127361.03 Da
• Isoelectric Point: 5.5783

>NTDB_id=712636 NP431_RS11865 WP_020333918.1 2593578..2596964(+) (chiS) [Vibrio natriegens strain 14048]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITALFFLQSHSQDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRQNAQQRYIEGSGDQTKTSILPESSNFVGSERYRLLHKRYHWAYSELLKRSDF
NDILLVDINGNVTYSIKKDDNYGTNLLTGRYKDAALGRAFQRLANDVSERRKVNEDYTPILISDFELENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADKNRESSIETLLVGGDQQPRTINTKLDDIQNSMEVITQALSGQTSVGTYTNGLDEA
IIAAYAPVKTRGVNWALVVQLPEKDAFSRIHQLEKLFVIAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
NTFDTVRKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGTIPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVNLASSTRLVLELSGHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTQAACGHFQVPEINLENTDDLSLPENPE
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCNELRQTFDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIRAHLTASKAEMRHIENKVLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRVRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYIGDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTHA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=712636 NP431_RS11865 WP_020333918.1 2593578..2596964(+) (chiS) [Vibrio natriegens strain 14048]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAAAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACCGCGCTTTTTTTCCTGCAGTCACACAGTCAAGATCTGCAAGAACAGAGCACGTCGCACCTGCTGT
CTGTACGAGATACCAAACAGCAGCAAATTATTGACTATTTTGAAGCACGCGAAACCGAAGTCATGGGCTTTGTCCGTTCG
GAGTTAGCTTATGCCAGCGGTGGACGCTTTTATGGTTTAGTCAATGCGTTCAGTCGCTTAGGAAACGACATTGAAGAGTC
ACGTCAAAATGCACAGCAACGTTATATTGAAGGCAGTGGCGATCAGACAAAAACGTCAATCTTGCCGGAGTCATCTAACT
TTGTCGGGAGCGAGCGTTATCGCCTGTTACACAAGCGCTATCATTGGGCTTATTCAGAACTTCTAAAACGCTCTGACTTC
AATGACATACTTTTAGTCGATATCAACGGTAACGTTACTTACTCAATCAAAAAAGACGACAATTACGGCACTAATCTTCT
CACTGGCCGCTATAAAGATGCTGCCCTAGGTAGAGCGTTTCAGCGCTTGGCCAATGATGTCAGCGAGCGCCGTAAAGTAA
ACGAAGACTATACTCCAATCCTTATCTCTGACTTTGAACTTGAAAATGGCAAGCAAGTCGCGTGGCTTGGCGCTCCTATC
GTTCAACAAGGATATCTCCATAGCTATGCCATGTTCCGATTACCAAATAATGGCATAACTAAACTAGTCGCAGACAAAAA
CCGCGAGTCATCGATTGAGACGCTATTAGTCGGAGGAGATCAACAACCTCGAACCATTAACACCAAGCTAGATGATATCC
AAAACAGTATGGAGGTCATCACTCAGGCACTTTCAGGTCAAACAAGCGTAGGTACTTATACAAACGGGCTCGATGAAGCC
ATTATCGCCGCCTATGCGCCAGTTAAAACCCGTGGTGTGAATTGGGCGTTGGTCGTGCAGTTACCAGAAAAAGACGCCTT
TTCTCGCATTCACCAGCTGGAAAAACTCTTCGTCATTGCGATGCTTACGGCGATCATACTGGTTGTGATTGCCTCGCACT
ATTTATCGAATTTCATCACCTCGCCACTGCTTAAATTAACCTGGGCAGCAGAGCGAGTATCAGCAGGCGATCTGGACGAA
AACACATTTGATACTGTTAGAAAAGACGAAATTGGTCGCTTAGCCATCAGTTTTGAGCGCATGCAACGTTCCATTCGTGA
AAAAATTCAGACGATCAAGAAGCAAAATGAAGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGACGAGCTGC
AACTGGCAGACAAGCTAAAAGATGAGTTTCTGGCAACGACCTCTCATGAACTGCGTACACCTTTGCACGGCATGGTCGGT
ATTGCAGAAACCTTGATATCCGGAGCCAACGGTACAATTCCGGCAAACCAGAAGTATCAGCTTGATATAATTATTAAAAG
TGGCCAACGTTTGGCTAACCTGGTCGACGACTTACTGGATTACCATAAAATGCGATACGGTAGCATGGACATCCAGAAGT
CGGCTGTTAACCTGGCAAGTTCAACCCGATTGGTGCTGGAGTTGTCGGGTCATTTACTTGGAAACAAGACCATTCGAATC
ATCAATCAAGTACCTAATGATCTCAAAGCAGTCTCAGCGGACCCACAACGACTTGAACAGGTGCTTTACAATCTGATAGG
AAACGCAATTAAGTACACCTCTGAAGGTAAGATCGTTATTTCTGCAGGAGTCGTAGACGATTTAGTTCGCGTTCAAGTGG
TCGATACCGGACAAGGTATTCCTGCTGAGCACCTTGAGCACATCTTTGAGCCTTTAATTCAAGCAGGACAGGACGAAAGT
CGATATCGTCAAGGTGCGGGGTTAGGTTTATCAATTAGCCGCCAGTTGATTGAGCTAATGGGAGGCTCCTTATATGTCAG
CAGCCAACCTATGGTAGGGACCACATTCAGCTTCACTCTGCCTCTCGCCAGTGAAGAAGAGATCCTAGCAACACAGACGC
AGGCAGCCTGTGGGCACTTCCAGGTTCCAGAAATTAACCTTGAGAACACAGACGACCTATCGCTACCAGAAAACCCAGAA
GGTCCGCTACTTTATGTAGCAGACGATGAACCAGTCAACCTACGAGTACTTGAAAGCTTTTTACGCTTAGAAGGCTATCG
TGTAAGAACCGTTTCAGATGGTCCAGAAACACTTGCTCTTGTCGAACAAGAAAAGCCGGAACTGCTGCTGCTCGATATCA
TGATGCCAGGAATGAGTGGCTATCAAGTATGTAATGAATTGCGTCAAACCTTTGATCATGCTGAGCTGCCAATCATTATG
CTAACCGCCTTAAGTCAAACTGAAGACCGAGTTAGAGGCTTTGAAGCCGGAGCAAACGATTATTTGTCGAAGCCTTTTAA
CAAACAAGAGCTTGCAGCCAGAATTAGAGCTCATTTGACCGCAAGTAAAGCAGAGATGCGCCATATTGAGAATAAAGTAC
TTGAGTCGGAACTTCGTCAACGAGCTGAAGTAGAAGCGAGCTTGCTTGAAACTCAGGGGCGTCTGCTAGAGCAGCTTGAG
TCCGCTCCTGAGGCGATTATTTGCTTGCGCGAAGATCAACGTGTTCGTTTTGCCAACGAAGCCGCATGTAAGCTGTTTAA
ACGTAGCTTAGAGCAAATTAAACGTTCGTCTGCCGATGAGCTGATTGCTCCAAAATTTCTGACCGTTAAGCAGCCACATT
ATTGCGGGAAAATTGATATTTATATCGGGGACATTCGCCAAAATATTGAAGCGGACATCCTTAAGCTTCCAGAAGGTTCC
GGCCTAGACGTTATGTACATATTTAATGTCGGTGGCGGCGCAAATACAGCGCGCATTCACAATCTGGAAACGGCAGTGGA
GGTACTTTCTCGCTATGCCTTTGACGGCGACAAAGAACAGCTACAGAAGCTTAAAGAGCTTGGAGGCGAGTTCACTCGAC
TGGCAGACAAAGCACTAGGCAATAAAAAAGACAAACAAGAAGTTATGCGTGAAGTACTGGTCGAAGCGATGACACATGCT
TTGGAATACTGGGAGTCTGTCACTGGAGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGTCTTTGGCGCGTTTACCTTGA
TAGAAGTACGCTACAAACCCGTACTCTAGATAAATACATGCGCATTGAAACCTTACCTAAAACTCCGCGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTCATCCTTGAGCACTGTAAAGAACAAAGTCCGGAGCGTGCTTACATTGAAGCGCAGCGTGAC
AAGCTGCAAAGGTTACTTACCAGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.554	100	0.756