Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NPS25_RS07280 Genome accession   NZ_CP101904
Coordinates   1414718..1415182 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain Ba-0321     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1409718..1420182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS07260 (NPS25_07260) - 1410198..1412018 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  NPS25_RS07265 (NPS25_07265) - 1411999..1413212 (-) 1214 Protein_1368 aminotransferase A -
  NPS25_RS07270 (NPS25_07270) - 1413413..1413574 (-) 162 WP_007409608.1 hypothetical protein -
  NPS25_RS07275 (NPS25_07275) cheV 1413763..1414674 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  NPS25_RS07280 (NPS25_07280) kre 1414718..1415182 (-) 465 WP_003154622.1 YkyB family protein Regulator
  NPS25_RS07285 (NPS25_07285) - 1415305..1416597 (-) 1293 WP_032868138.1 MFS transporter -
  NPS25_RS07290 (NPS25_07290) - 1416673..1417167 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  NPS25_RS07295 (NPS25_07295) - 1417242..1418105 (-) 864 WP_256683780.1 metallophosphoesterase -
  NPS25_RS07300 (NPS25_07300) fadH 1418249..1419013 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  NPS25_RS07305 (NPS25_07305) - 1419127..1419675 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=712571 NPS25_RS07280 WP_003154622.1 1414718..1415182(-) (kre) [Bacillus velezensis strain Ba-0321]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=712571 NPS25_RS07280 WP_003154622.1 1414718..1415182(-) (kre) [Bacillus velezensis strain Ba-0321]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTGGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929