Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NPS25_RS05810 Genome accession   NZ_CP101904
Coordinates   1150032..1150223 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain Ba-0321     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1145032..1155223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS05780 (NPS25_05780) argF 1145884..1146855 (+) 972 WP_256683766.1 ornithine carbamoyltransferase -
  NPS25_RS05785 (NPS25_05785) - 1146931..1147110 (+) 180 WP_003155070.1 YjzC family protein -
  NPS25_RS05790 (NPS25_05790) - 1147147..1147332 (-) 186 WP_007409129.1 YjzD family protein -
  NPS25_RS05795 (NPS25_05795) - 1147593..1148327 (+) 735 WP_144664082.1 hypothetical protein -
  NPS25_RS05800 (NPS25_05800) - 1148410..1148976 (+) 567 WP_144664083.1 hypothetical protein -
  NPS25_RS05805 (NPS25_05805) med 1149066..1150019 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  NPS25_RS05810 (NPS25_05810) comZ 1150032..1150223 (+) 192 WP_003155061.1 ComZ family protein Regulator
  NPS25_RS05815 (NPS25_05815) - 1150252..1150470 (-) 219 WP_007409123.1 hypothetical protein -
  NPS25_RS05820 (NPS25_05820) - 1150637..1151575 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  NPS25_RS05825 (NPS25_05825) fabF 1151598..1152836 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  NPS25_RS05830 (NPS25_05830) - 1152920..1153705 (+) 786 WP_032866148.1 DUF2268 domain-containing protein -
  NPS25_RS05835 (NPS25_05835) - 1153879..1154865 (+) 987 WP_007409119.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=712564 NPS25_RS05810 WP_003155061.1 1150032..1150223(+) (comZ) [Bacillus velezensis strain Ba-0321]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=712564 NPS25_RS05810 WP_003155061.1 1150032..1150223(+) (comZ) [Bacillus velezensis strain Ba-0321]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794