Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NPS25_RS04390 Genome accession   NZ_CP101904
Coordinates   888739..889530 (+) Length   263 a.a.
NCBI ID   WP_031378903.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 883739..894530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS04365 (NPS25_04365) - 885733..886617 (+) 885 WP_039252294.1 PhzF family phenazine biosynthesis isomerase -
  NPS25_RS04370 (NPS25_04370) - 886694..887278 (+) 585 WP_015417058.1 nitroreductase -
  NPS25_RS04375 (NPS25_04375) - 887318..887509 (-) 192 WP_003155508.1 YfhD family protein -
  NPS25_RS04380 (NPS25_04380) - 887580..887690 (-) 111 WP_003155504.1 YfhE family protein -
  NPS25_RS04385 (NPS25_04385) - 887748..888647 (-) 900 WP_033575004.1 TIGR01777 family oxidoreductase -
  NPS25_RS04390 (NPS25_04390) recX 888739..889530 (+) 792 WP_031378903.1 recombination regulator RecX Regulator
  NPS25_RS04395 (NPS25_04395) - 889537..889851 (+) 315 WP_064116061.1 YfhH family protein -
  NPS25_RS04400 (NPS25_04400) - 889996..891189 (+) 1194 WP_256683812.1 MFS transporter -
  NPS25_RS04405 (NPS25_04405) - 891229..891618 (-) 390 WP_015417061.1 DUF2606 family protein -
  NPS25_RS04410 (NPS25_04410) - 891581..892492 (-) 912 WP_015417062.1 serine protease -
  NPS25_RS04415 (NPS25_04415) - 892639..892791 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  NPS25_RS04420 (NPS25_04420) - 892915..893184 (+) 270 WP_003155492.1 YfhJ family protein -
  NPS25_RS04425 (NPS25_04425) - 893317..893844 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  NPS25_RS04430 (NPS25_04430) - 893930..894265 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30950.16 Da        Isoelectric Point: 6.2735

>NTDB_id=712555 NPS25_RS04390 WP_031378903.1 888739..889530(+) (recX) [Bacillus velezensis strain Ba-0321]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIKQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=712555 NPS25_RS04390 WP_031378903.1 888739..889530(+) (recX) [Bacillus velezensis strain Ba-0321]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAGGACAAAAAGCTGTCCACAAAAGAGATCAAACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAACAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795