Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NPS25_RS01970 Genome accession   NZ_CP101904
Coordinates   408435..408599 (+) Length   54 a.a.
NCBI ID   WP_269434478.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 403435..413599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS01965 (NPS25_01965) srfAB 405326..408418 (+) 3093 Protein_348 surfactin non-ribosomal peptide synthetase SrfAB -
  NPS25_RS01970 (NPS25_01970) comS 408435..408599 (+) 165 WP_269434478.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6194.21 Da        Isoelectric Point: 12.0559

>NTDB_id=712550 NPS25_RS01970 WP_269434478.1 408435..408599(+) (comS) [Bacillus velezensis strain Ba-0321]
MRARRNSSLNRSDKRLIRTIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=712550 NPS25_RS01970 WP_269434478.1 408435..408599(+) (comS) [Bacillus velezensis strain Ba-0321]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAACCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

59.091

81.481

0.481