Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NPA43_RS05600 Genome accession   NZ_CP101833
Coordinates   1141402..1142064 (+) Length   220 a.a.
NCBI ID   WP_230030905.1    Uniprot ID   -
Organism   Bacillus pumilus strain NDY-10     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136402..1147064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA43_RS05570 (NPA43_05570) - 1136733..1137812 (+) 1080 WP_268254798.1 ABC transporter ATP-binding protein -
  NPA43_RS05575 (NPA43_05575) - 1137814..1138731 (+) 918 WP_099728264.1 ABC transporter ATP-binding protein -
  NPA43_RS05580 (NPA43_05580) - 1138834..1139121 (+) 288 WP_256499463.1 hypothetical protein -
  NPA43_RS05585 (NPA43_05585) - 1139265..1139843 (+) 579 WP_099728262.1 GNAT family N-acetyltransferase -
  NPA43_RS05590 (NPA43_05590) spxA 1140037..1140432 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  NPA43_RS05595 (NPA43_05595) - 1140472..1141137 (-) 666 WP_230030906.1 TerC family protein -
  NPA43_RS05600 (NPA43_05600) mecA 1141402..1142064 (+) 663 WP_230030905.1 adaptor protein MecA Regulator
  NPA43_RS05605 (NPA43_05605) cls 1142151..1143671 (+) 1521 WP_099728259.1 cardiolipin synthase -
  NPA43_RS05610 (NPA43_05610) - 1143834..1144856 (+) 1023 WP_256499465.1 competence protein CoiA -
  NPA43_RS05615 (NPA43_05615) pepF 1145211..1147037 (+) 1827 WP_305881449.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 26312.14 Da        Isoelectric Point: 4.0510

>NTDB_id=712220 NPA43_RS05600 WP_230030905.1 1141402..1142064(+) (mecA) [Bacillus pumilus strain NDY-10]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTEESLDALLDDFHKEEQDQEEHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSFE
NRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLQEYGQLIIKGNALETLQQHFS

Nucleotide


Download         Length: 663 bp        

>NTDB_id=712220 NPA43_RS05600 WP_230030905.1 1141402..1142064(+) (mecA) [Bacillus pumilus strain NDY-10]
ATGGAAATCGAAAGAATAAATGAACATACAGTGAAATTTTATATTTCCTATGGTGATATTGAAGATCGCGGTTTTGACCG
TGAAGAGATTTGGTATAATCGTGAGCGCAGTGAAGAGCTGTTCTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAGT
TTGCAGTAGAGGGACCGCTTTGGATTCAAGTACAGGCCCTTGATAAAGGCCTTGAAATTGTCGTGACAAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGAAGAAAGCCTAGATGCACTGCT
TGATGATTTTCATAAAGAAGAGCAGGATCAAGAAGAACATAATGAGAAGGACAAAAAGCTTCAACTCCAATTCGTATTGA
AAATGGATGATTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTTGAA
AACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTCTGCTTGA
ATACGCCCATGAATCAGTGGTCAGCATCTACAGACTACAAGAATACGGTCAGCTGATTATTAAAGGGAATGCCCTTGAAA
CGCTTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

76.471

100

0.768