Detailed information NTG0711985

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NOX82_RS29280
• Genome accession: NZ_CP101752
• Coordinates: 6679710..6680774 (-)
• Length: 354 a.a.
• NCBI ID: WP_009613650.1
• Uniprot ID: A0A1A5D9E0
• Organism: Pseudomonas citronellolis strain C12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6674710..6685774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NOX82_RS29255 (NOX82_29255)	aroK	6675260..6675751 (-)	492	WP_370311007.1	shikimate kinase AroK	-
NOX82_RS29260 (NOX82_29260)	pilQ	6675787..6677880 (-)	2094	WP_256513230.1	type IV pilus secretin PilQ	Machinery gene
NOX82_RS29265 (NOX82_29265)	pilP	6677937..6678461 (-)	525	WP_074985598.1	type 4a pilus biogenesis lipoprotein PilP	-
NOX82_RS29270 (NOX82_29270)	pilO	6678458..6679114 (-)	657	WP_009613645.1	type 4a pilus biogenesis protein PilO	-
NOX82_RS29275 (NOX82_29275)	pilN	6679111..6679710 (-)	600	WP_009613648.1	type 4a pilus biogenesis protein PilN	-
NOX82_RS29280 (NOX82_29280)	pilM	6679710..6680774 (-)	1065	WP_009613650.1	pilus assembly protein PilM	Machinery gene
NOX82_RS29285 (NOX82_29285)	-	6680960..6683392 (+)	2433	WP_256513234.1	penicillin-binding protein 1A	-
NOX82_RS29290 (NOX82_29290)	-	6683805..6684296 (-)	492	WP_074985605.1	M48 family metallopeptidase	-
NOX82_RS29295 (NOX82_29295)	-	6684358..6685128 (-)	771	WP_074985607.1	class I SAM-dependent methyltransferase	-
NOX82_RS29300 (NOX82_29300)	-	6685172..6685594 (-)	423	WP_074985610.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37773.09 Da
• Isoelectric Point: 4.4526

>NTDB_id=711985 NOX82_RS29280 WP_009613650.1 6679710..6680774(-) (pilM) [Pseudomonas citronellolis strain C12]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNSVVEKNIAELEGVGQALSRVVAKARTGVKTAAV
AVAGSAVITKTIEMDGGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGVSARNAERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFGLLGDQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMVLSNKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=711985 NOX82_RS29280 WP_009613650.1 6679710..6680774(-) (pilM) [Pseudomonas citronellolis strain C12]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACACTGCTGGGGATCGACATCAGTTCGACTTCGGTCAAACTCCTCGAGTT
GAGCCGTTCGGGCGGGCGCTACAAGGTAGAGGCCTACGCCGTAGAGCCGCTCCCGCCGAACTCGGTGGTCGAGAAAAACA
TCGCCGAACTGGAGGGGGTCGGCCAGGCGCTGTCGCGGGTGGTCGCCAAGGCGCGCACCGGCGTGAAGACGGCTGCCGTG
GCGGTCGCCGGCTCGGCGGTCATCACCAAGACCATCGAGATGGACGGCGGGCTTTCCGAAGACGAGCTGGAGAACCAGCT
CAAGATCGAGGCCGACCAGTACATTCCCTATCCCCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGCGTATCCGCGC
GCAATGCCGAGCGCGTCGACGTGCTGCTGGCGGCCTGCCGCAAGGAGAACGTCGAGGTGCGCGAGGCCGCGCTGGCCCTG
GCCGGGCTCACCGCCAAGGTGGTGGACGTCGAGGCCTACGCGCTGGAGCGCGCCTTCGGCCTGCTCGGCGACCAGTTGGG
CGGCAACGCCGACGAGCTGACCGTCGCGGTGGTCGACATCGGCGCCACCATGACCACCCTCAGCGTCCTCCACCACGGCC
GCACCATCTATACCCGCGAGCAGCTGTTCGGCGGGCGCCAGCTCACCGAGGAGATCCAGCGCCGCTACGGCCTGTCGGTG
GAGGAAGCCGGCCTTGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTGTTGCAACCGTTCAAGGATGC
GGTGGTGCAGCAGGTTTCGCGCTCCCTGCAGTTCTTCTTCGCCGCGGGCCAGTTCAACGACGTCGACTACATCCTGCTCG
CCGGCGGCACGGCTTCCATTCCCGACCTGGACCGGCTCATCCAGCAGAAGATCGGCACCCCGACGCTGGTGGCCAACCCC
TTCGCCGACATGGTGCTGAGCAACAAGGTGAATGCCGGGGCGCTGGCCAGTGACGCGCCGGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1A5D9E0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.345	100	0.573
comM	Acinetobacter nosocomialis M2	57.345	100	0.573
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.045	100	0.46