Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NOX35_RS22510 Genome accession   NZ_CP101743
Coordinates   4879666..4880070 (-) Length   134 a.a.
NCBI ID   WP_003071158.1    Uniprot ID   A0A5S4T294
Organism   Comamonas sp. C11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4874666..4885070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NOX35_RS22495 (NOX35_22495) - 4876498..4878741 (-) 2244 WP_182284491.1 methyl-accepting chemotaxis protein -
  NOX35_RS22500 (NOX35_22500) - 4878761..4879288 (-) 528 WP_182284492.1 chemotaxis protein CheW -
  NOX35_RS22505 (NOX35_22505) - 4879304..4879666 (-) 363 WP_182284493.1 PleD family two-component system response regulator -
  NOX35_RS22510 (NOX35_22510) pilG 4879666..4880070 (-) 405 WP_003071158.1 PleD family two-component system response regulator Regulator
  NOX35_RS22515 (NOX35_22515) - 4880121..4880273 (-) 153 WP_034399566.1 rubredoxin -
  NOX35_RS22520 (NOX35_22520) - 4880389..4881357 (+) 969 WP_256494789.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  NOX35_RS22525 (NOX35_22525) hemL 4881341..4882645 (+) 1305 WP_256494790.1 glutamate-1-semialdehyde 2,1-aminomutase -
  NOX35_RS22530 (NOX35_22530) - 4882796..4884568 (+) 1773 WP_256494791.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14667.90 Da        Isoelectric Point: 6.9230

>NTDB_id=711933 NOX35_RS22510 WP_003071158.1 4879666..4880070(-) (pilG) [Comamonas sp. C11]
MTASGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=711933 NOX35_RS22510 WP_003071158.1 4879666..4880070(-) (pilG) [Comamonas sp. C11]
GTGACAGCATCTGGTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAACACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTCACGAAGTTCTTCTGGCCGATGATGGCTTCGATGCCCTGTCCAAGGTCAATGACTACCAGCCCCAGC
TCATCTTCTGCGACATTCTGATGCCCAAGCTCGATGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCTCGCTTTGCC
AATACGCCCGTCGTGATGCTGTCATCCAAGGACGGTGTATTCGACAAGGCTCGAGGTCGCATGGTGGGCTGCCAAGACTA
TCTGACCAAACCATTTACCAAAGATCAATTGCTGCAAGCCGTACAACAGTTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5S4T294

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.621

86.567

0.507