Detailed information NTG0711888

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NPN27_RS20845
• Genome accession: NZ_CP101739
• Coordinates: 4435975..4437237 (-)
• Length: 420 a.a.
• NCBI ID: WP_017244109.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain J15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4430975..4442237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPN27_RS20830 (NPN27_20830)	rpoH	4433324..4434178 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
NPN27_RS20835 (NPN27_20835)	ftsX	4434291..4435310 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
NPN27_RS20840 (NPN27_20840)	ftsE	4435310..4435978 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
NPN27_RS20845 (NPN27_20845)	pilA	4435975..4437237 (-)	1263	WP_017244109.1	signal recognition particle-docking protein FtsY	Machinery gene
NPN27_RS20850 (NPN27_20850)	-	4437465..4438817 (+)	1353	WP_017244110.1	M16 family metallopeptidase	-
NPN27_RS20855 (NPN27_20855)	-	4438810..4440351 (+)	1542	WP_017244111.1	M16 family metallopeptidase	-
NPN27_RS20860 (NPN27_20860)	rsmD	4440351..4440968 (+)	618	WP_011915000.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NPN27_RS20865 (NPN27_20865)	-	4440962..4441366 (-)	405	WP_026006467.1	hypothetical protein	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 44772.92 Da
• Isoelectric Point: 4.7834

>NTDB_id=711888 NPN27_RS20845 WP_017244109.1 4435975..4437237(-) (pilA) [Stutzerimonas stutzeri strain J15]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIK
SPPPDSEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTADV
GVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDASKRPYVILVVGVNGVGKTTTIGKLAKKLQL
DGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKK
VRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGIDD
LRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1263 bp

>NTDB_id=711888 NPN27_RS20845 WP_017244109.1 4435975..4437237(-) (pilA) [Stutzerimonas stutzeri strain J15]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCATGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCAAG
TCGCCGCCGCCAGACTCTGAACCCGAACCAGAGCCAGAGCCAGAGCCGGTATCTGCCCCGGTCGTTGCGGCCACGTCGGA
AGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATAGGCGAAGGCATGG
CCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGATGAACTGGAAACCCGCCTGCTGACCGCCGACGTC
GGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGGCGCGCT
CTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCAGCAAGCGTC
CCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTGCAACTC
GACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGTCTGGGGCGAGCG
CAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCGCCAAGG
CACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAAGAGTTGAAGAAG
GTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGTACCGGACAGAA
CGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCACCGCCA
AGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGTATCGACGAT
CTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (215-414)

• SRP54-type protein, helical bundle domain (SRP54_N) (130-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.238	100	0.502