Detailed information NTG0711879

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NPN27_RS13860
• Genome accession: NZ_CP101739
• Coordinates: 2924150..2926375 (-)
• Length: 741 a.a.
• NCBI ID: WP_088137608.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain J15
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2919150..2931375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPN27_RS13825 (NPN27_13825)	murB	2919540..2920559 (-)	1020	WP_256517421.1	UDP-N-acetylmuramate dehydrogenase	-
NPN27_RS13830 (NPN27_13830)	-	2920556..2921023 (-)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
NPN27_RS13835 (NPN27_13835)	kdsB	2921025..2921789 (-)	765	WP_014597104.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NPN27_RS13840 (NPN27_13840)	-	2921786..2921971 (-)	186	WP_011913743.1	Trm112 family protein	-
NPN27_RS13845 (NPN27_13845)	lpxK	2922017..2923021 (-)	1005	WP_013983258.1	tetraacyldisaccharide 4'-kinase	-
NPN27_RS13850 (NPN27_13850)	-	2923021..2923449 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
NPN27_RS13855 (NPN27_13855)	-	2923446..2924078 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
NPN27_RS13860 (NPN27_13860)	comA	2924150..2926375 (-)	2226	WP_088137608.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NPN27_RS13865 (NPN27_13865)	-	2926520..2927035 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
NPN27_RS13870 (NPN27_13870)	-	2927048..2928292 (-)	1245	WP_256519145.1	lipoprotein-releasing ABC transporter permease subunit	-
NPN27_RS13875 (NPN27_13875)	lolD	2928292..2928990 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
NPN27_RS13880 (NPN27_13880)	-	2928998..2930245 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
NPN27_RS13885 (NPN27_13885)	-	2930278..2930913 (+)	636	WP_014597110.1	PilZ domain-containing protein	-
NPN27_RS13890 (NPN27_13890)	-	2930917..2931225 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81097.70 Da
• Isoelectric Point: 10.0442

>NTDB_id=711879 NPN27_RS13860 WP_088137608.1 2924150..2926375(-) (comA) [Stutzerimonas stutzeri strain J15]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLF
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LVFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREYALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAEHCESGRSWQWNNVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVIERLETLDIQAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=711879 NPN27_RS13860 WP_088137608.1 2924150..2926375(-) (comA) [Stutzerimonas stutzeri strain J15]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTCTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTTTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGTTC
GATCCCCTGGTCACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTCGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGTATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACATTGCGAAAGCGGTCGCAGCTGGCAGTGGAACAATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATTGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGTGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGATCGAGCGGCTCGAGACCCTCGATATCCAGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.087	96.356	0.646
comA	Ralstonia pseudosolanacearum GMI1000	36.761	100	0.386