Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NPA28_RS06240 Genome accession   NZ_CP101718
Coordinates   1263670..1264326 (+) Length   218 a.a.
NCBI ID   WP_024120921.1    Uniprot ID   A0A9Q4HP90
Organism   Bacillus halotolerans strain S-5     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1258670..1269326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA28_RS06210 (NPA28_06210) oppF 1259128..1260045 (+) 918 WP_256766782.1 oligopeptide ABC transporter ATP-binding protein OppF -
  NPA28_RS06215 (NPA28_06215) - 1260152..1261369 (+) 1218 WP_256766965.1 MFS transporter -
  NPA28_RS06220 (NPA28_06220) - 1261536..1262114 (+) 579 WP_059293039.1 GNAT family N-acetyltransferase -
  NPA28_RS06225 (NPA28_06225) spx 1262294..1262689 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  NPA28_RS06230 (NPA28_06230) - 1262735..1263391 (-) 657 WP_044156385.1 TerC family protein -
  NPA28_RS06235 (NPA28_06235) - 1263563..1263703 (+) 141 WP_125825429.1 hypothetical protein -
  NPA28_RS06240 (NPA28_06240) mecA 1263670..1264326 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  NPA28_RS06245 (NPA28_06245) coiA 1264484..1265635 (+) 1152 WP_256766783.1 competence protein CoiA family protein Machinery gene
  NPA28_RS06250 (NPA28_06250) pepF 1265865..1267694 (+) 1830 WP_176471078.1 oligoendopeptidase F -
  NPA28_RS06255 (NPA28_06255) - 1267731..1267898 (-) 168 WP_024120925.1 hypothetical protein -
  NPA28_RS06260 (NPA28_06260) spxH 1268212..1269111 (-) 900 WP_044156379.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25879.69 Da        Isoelectric Point: 4.0810

>NTDB_id=711744 NPA28_RS06240 WP_024120921.1 1263670..1264326(+) (mecA) [Bacillus halotolerans strain S-5]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=711744 NPA28_RS06240 WP_024120921.1 1263670..1264326(+) (mecA) [Bacillus halotolerans strain S-5]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTACGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGTC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTATCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.789

100

0.968