Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NPA28_RS02015 Genome accession   NZ_CP101718
Coordinates   388453..388593 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain S-5     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383453..393593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA28_RS02010 (NPA28_02010) srfAB 385317..388409 (+) 3093 Protein_352 surfactin non-ribosomal peptide synthetase SrfAB -
  NPA28_RS02015 (NPA28_02015) comS 388453..388593 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=711727 NPA28_RS02015 WP_223203921.1 388453..388593(+) (comS) [Bacillus halotolerans strain S-5]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=711727 NPA28_RS02015 WP_223203921.1 388453..388593(+) (comS) [Bacillus halotolerans strain S-5]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913