Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   POF58_RS02535 Genome accession   NZ_CP116711
Coordinates   442987..443763 (-) Length   258 a.a.
NCBI ID   WP_000704972.1    Uniprot ID   P59210
Organism   Streptococcus agalactiae strain CNCTC 10/84 Cas9 AEKOrevertant     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 437987..448763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF58_RS02530 (POF58_02530) - 442370..442903 (-) 534 WP_001239184.1 DUF402 domain-containing protein -
  POF58_RS02535 (POF58_02535) recX 442987..443763 (-) 777 WP_000704972.1 recombination regulator RecX Regulator
  POF58_RS02540 (POF58_02540) rlmD 443862..445217 (+) 1356 WP_001103624.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  POF58_RS02545 (POF58_02545) - 445486..446250 (+) 765 WP_000586351.1 nucleoside phosphorylase -
  POF58_RS02550 (POF58_02550) - 446284..446727 (+) 444 WP_000267392.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30713.66 Da        Isoelectric Point: 9.7805

>NTDB_id=711552 POF58_RS02535 WP_000704972.1 442987..443763(-) (recX) [Streptococcus agalactiae strain CNCTC 10/84 Cas9 AEKOrevertant]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIINAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIVHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKHDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=711552 POF58_RS02535 WP_000704972.1 442987..443763(-) (recX) [Streptococcus agalactiae strain CNCTC 10/84 Cas9 AEKOrevertant]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAATTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATACGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGACCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAACTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGTGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTATCAAAAAAACATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59210

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

37.931

100

0.384