Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NN913_RS07085 Genome accession   NZ_CP101621
Coordinates   1350891..1351487 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain 906     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345891..1356487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NN913_RS07055 (NN913_07050) - 1346105..1346560 (+) 456 WP_196616581.1 flavodoxin -
  NN913_RS07060 (NN913_07055) dapD 1346642..1347352 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NN913_RS07065 (NN913_07060) - 1347423..1348547 (+) 1125 WP_255764261.1 N-acetyldiaminopimelate deacetylase -
  NN913_RS07070 (NN913_07065) - 1348608..1348853 (+) 246 WP_003154596.1 YkuS family protein -
  NN913_RS07075 (NN913_07070) - 1348887..1349693 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  NN913_RS07080 (NN913_07075) - 1349981..1350439 (+) 459 WP_060387295.1 TlpA disulfide reductase family protein -
  NN913_RS07085 (NN913_07080) rok 1350891..1351487 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  NN913_RS07090 (NN913_07085) - 1351508..1352500 (-) 993 WP_139890270.1 sporulation protein -
  NN913_RS07095 (NN913_07090) - 1352646..1353248 (+) 603 WP_015388303.1 molybdenum cofactor guanylyltransferase -
  NN913_RS07100 (NN913_07095) - 1353300..1354319 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  NN913_RS07105 (NN913_07100) glp 1354337..1355629 (+) 1293 WP_025851480.1 gephyrin-like molybdotransferase Glp -
  NN913_RS07110 (NN913_07105) mobB 1355590..1356111 (+) 522 WP_003154581.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=711009 NN913_RS07085 WP_003154591.1 1350891..1351487(+) (rok) [Bacillus velezensis strain 906]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=711009 NN913_RS07085 WP_003154591.1 1350891..1351487(+) (rok) [Bacillus velezensis strain 906]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843