Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   POF60_RS01645 Genome accession   NZ_CP116705
Coordinates   274096..274830 (+) Length   244 a.a.
NCBI ID   WP_000589159.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain CNCTC 10/84 dCas9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 269096..279830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF60_RS01630 (POF60_01630) - 270019..271449 (+) 1431 WP_001217280.1 helix-turn-helix domain-containing protein -
  POF60_RS01635 (POF60_01635) recP/tkt 271574..273559 (+) 1986 WP_000141873.1 transketolase Machinery gene
  POF60_RS01640 (POF60_01640) - 273771..274076 (+) 306 WP_000711206.1 bacteriocin immunity protein -
  POF60_RS01645 (POF60_01645) pptA 274096..274830 (+) 735 WP_000589159.1 ABC transporter ATP-binding protein Regulator
  POF60_RS01650 (POF60_01650) - 274834..276438 (+) 1605 WP_001104588.1 hypothetical protein -
  POF60_RS01655 (POF60_01655) - 276646..278031 (-) 1386 WP_038406055.1 PTS transporter subunit EIIC -
  POF60_RS01660 (POF60_01660) proB 278172..278975 (+) 804 WP_000820354.1 glutamate 5-kinase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27519.67 Da        Isoelectric Point: 4.6741

>NTDB_id=710895 POF60_RS01645 WP_000589159.1 274096..274830(+) (pptA) [Streptococcus agalactiae strain CNCTC 10/84 dCas9]
MIKFEHVSKVYGEKEALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTEHRDQIKKKIGYVP
DSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITKLVDIFELEEQRYNPIESFSHGMRQKVIVIGALLPNPDIWILDEPL
TGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDKDLETIYLELAGRQA
SREG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=710895 POF60_RS01645 WP_000589159.1 274096..274830(+) (pptA) [Streptococcus agalactiae strain CNCTC 10/84 dCas9]
ATGATTAAGTTTGAACATGTTTCTAAAGTATACGGGGAAAAAGAAGCTCTCAGTGATTTAACCCTCTCTATTAAAGATGG
TGAGATTTTTGGATTAATCGGTCACAATGGAGCAGGAAAAACAACGACAATTAGTATTCTAACATCTATTATTGATGCAA
CTTATGGCCAAGTCTATATTGATGACCTACTTTTGACAGAACATCGTGACCAAATTAAGAAAAAAATAGGTTATGTACCG
GACTCGCCAGATATTTTCTTAAATTTAACCGCAGAGGAATACTGGTACTTTTTAGCTAAAATTTATGACGTTGCCCCAGA
AGATATTGAAGCACGTATCACAAAATTGGTAGACATATTTGAACTAGAGGAGCAACGCTATAATCCTATTGAAAGTTTTT
CACATGGTATGCGTCAAAAAGTCATTGTTATAGGTGCCCTTCTTCCAAATCCTGACATTTGGATTCTAGATGAGCCGTTA
ACTGGTTTAGACCCTCAAGCTTCTTTTGATTTGAAAGAAATGATGAAAGAACATGCTAAAAATGGAAAAACAGTTATTTT
TTCAACACATGTCTTAGCAGTTGCAGAACAGTTATGCGACAGAATAGGTATTTTGAAACAAGGGAAATTAATCTTTGTCG
GTAGCTTAGGTGAGTTAAAAATGCAATATCCAGATAAAGATTTGGAAACTATCTATTTGGAATTAGCAGGACGTCAAGCT
AGTAGGGAGGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

38.272

99.59

0.381
  pptA Streptococcus salivarius strain HSISS4

37.86

99.59

0.377