Detailed information NTG0710892

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NNG64_RS18290
• Genome accession: NZ_CP101610
• Coordinates: 3668367..3669512 (+)
• Length: 381 a.a.
• NCBI ID: WP_082761635.1
• Uniprot ID: A0AAI8HKG6
• Organism: Bacillus siamensis strain WYJ-E14
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3663367..3674512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NNG64_RS18270 (NNG64_18225)	fnr	3663841..3664557 (-)	717	WP_060964027.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
NNG64_RS18275 (NNG64_18230)	narK	3664658..3665845 (-)	1188	WP_060964026.1	nitrate transporter NarK	-
NNG64_RS18280 (NNG64_18235)	argS	3665980..3667650 (-)	1671	WP_060964025.1	arginine--tRNA ligase	-
NNG64_RS18285 (NNG64_18240)	-	3667647..3668075 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
NNG64_RS18290 (NNG64_18245)	rapF	3668367..3669512 (+)	1146	WP_082761635.1	Rap family tetratricopeptide repeat protein	Regulator
NNG64_RS18295 (NNG64_18250)	-	3669496..3669615 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
NNG64_RS18300 (NNG64_18255)	speB	3669738..3670610 (-)	873	WP_060964024.1	agmatinase	-
NNG64_RS18305 (NNG64_18260)	speE	3670669..3671499 (-)	831	WP_060964023.1	spermidine synthase	-
NNG64_RS18310 (NNG64_18265)	-	3671699..3673771 (+)	2073	WP_060964022.1	transglycosylase domain-containing protein	-
NNG64_RS18315 (NNG64_18270)	-	3673796..3674227 (-)	432	WP_060964021.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45784.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=710892 NNG64_RS18290 WP_082761635.1 3668367..3669512(+) (rapF) [Bacillus siamensis strain WYJ-E14]
MASVVSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELASLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=710892 NNG64_RS18290 WP_082761635.1 3668367..3669512(+) (rapF) [Bacillus siamensis strain WYJ-E14]
GTGGCGAGTGTTGTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATTAAAGAAGAGCTTGCAAGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTAGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAGTATCTTTCAGCCATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGAAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533