Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NNG64_RS10330 Genome accession   NZ_CP101610
Coordinates   2161959..2162423 (+) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus siamensis strain WYJ-E14     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2156959..2167423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS10305 (NNG64_10285) - 2157529..2158013 (-) 485 Protein_1999 hypothetical protein -
  NNG64_RS10310 (NNG64_10290) fadH 2158128..2158892 (-) 765 WP_060962920.1 2,4-dienoyl-CoA reductase -
  NNG64_RS10315 (NNG64_10295) - 2159036..2159899 (+) 864 WP_060962921.1 metallophosphoesterase -
  NNG64_RS10320 (NNG64_10300) - 2159974..2160468 (+) 495 WP_095240832.1 L,D-transpeptidase family protein -
  NNG64_RS10325 (NNG64_10305) - 2160544..2161836 (+) 1293 WP_060962922.1 MFS transporter -
  NNG64_RS10330 (NNG64_10310) kre 2161959..2162423 (+) 465 WP_013352067.1 YkyB family protein Regulator
  NNG64_RS10335 (NNG64_10315) cheV 2162467..2163378 (-) 912 WP_060962923.1 chemotaxis protein CheV -
  NNG64_RS10340 (NNG64_10320) - 2163567..2163728 (+) 162 WP_167388676.1 hypothetical protein -
  NNG64_RS10345 (NNG64_10325) - 2163930..2165099 (+) 1170 WP_060962924.1 aminotransferase A -
  NNG64_RS10350 (NNG64_10330) - 2165124..2166944 (-) 1821 WP_060962925.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=710861 NNG64_RS10330 WP_013352067.1 2161959..2162423(+) (kre) [Bacillus siamensis strain WYJ-E14]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=710861 NNG64_RS10330 WP_013352067.1 2161959..2162423(+) (kre) [Bacillus siamensis strain WYJ-E14]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACATTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTAGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935