Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NNG64_RS04290 Genome accession   NZ_CP101610
Coordinates   835737..836528 (+) Length   263 a.a.
NCBI ID   WP_060963296.1    Uniprot ID   A0AAI8N1G2
Organism   Bacillus siamensis strain WYJ-E14     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 830737..841528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS04265 (NNG64_04265) - 832733..833617 (+) 885 WP_060963298.1 PhzF family phenazine biosynthesis isomerase -
  NNG64_RS04270 (NNG64_04270) - 833694..834278 (+) 585 WP_016936723.1 nitroreductase -
  NNG64_RS04275 (NNG64_04275) - 834317..834508 (-) 192 WP_016936722.1 YfhD family protein -
  NNG64_RS04280 (NNG64_04280) - 834578..834688 (-) 111 WP_003155504.1 YfhE family protein -
  NNG64_RS04285 (NNG64_04285) - 834746..835645 (-) 900 WP_060963297.1 TIGR01777 family oxidoreductase -
  NNG64_RS04290 (NNG64_04290) recX 835737..836528 (+) 792 WP_060963296.1 recombination regulator RecX Regulator
  NNG64_RS04295 (NNG64_04295) - 836535..836849 (+) 315 WP_060963295.1 YfhH family protein -
  NNG64_RS04300 (NNG64_04300) - 836991..838184 (+) 1194 WP_101605618.1 MFS transporter -
  NNG64_RS04305 (NNG64_04305) - 838355..838507 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  NNG64_RS04310 (NNG64_04310) - 838631..838900 (+) 270 WP_016936717.1 YfhJ family protein -
  NNG64_RS04315 (NNG64_04315) - 839030..839557 (+) 528 WP_060963293.1 SH3 domain-containing protein -
  NNG64_RS04320 (NNG64_04320) - 839643..839996 (+) 354 WP_256077045.1 SdpI family protein -
  NNG64_RS04325 (NNG64_04325) - 839909..840592 (+) 684 Protein_807 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31159.46 Da        Isoelectric Point: 6.5203

>NTDB_id=710835 NNG64_RS04290 WP_060963296.1 835737..836528(+) (recX) [Bacillus siamensis strain WYJ-E14]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDEAKKAFNRAVDFLSYRMRSEKEV
RDHLKKKETPEMVIPEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDETEMEALKIHAEKAIRKYRYDGSYESRMK
VKQYLFRKGFSIDDIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=710835 NNG64_RS04290 WP_060963296.1 835737..836528(+) (recX) [Bacillus siamensis strain WYJ-E14]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAACACTGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGAAGCGAAAAAAGCCTTTAACCGCGCCGTAGATTTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGACCATCTGAAGAAAAAAGAAACACCTGAGATGGTCATTCCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCAAGCACCCACAAGAAAACAAACGGCAAAGGCCCTGACGTCTTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGGAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTTCCATTCGACGTGATCAACGCCGCCCTGGAGCAGACGGAGTATGAGAATGATGACGAAACTG
AGATGGAAGCCCTGAAGATTCATGCGGAAAAGGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCAGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGAACAATTTTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

80.228

100

0.802