Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NNG64_RS01790 Genome accession   NZ_CP101610
Coordinates   345826..345990 (+) Length   54 a.a.
NCBI ID   WP_269465405.1    Uniprot ID   -
Organism   Bacillus siamensis strain WYJ-E14     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 340826..350990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS01785 (NNG64_01785) srfAB 342717..345809 (+) 3093 Protein_311 surfactin non-ribosomal peptide synthetase SrfAB -
  NNG64_RS01790 (NNG64_01790) comS 345826..345990 (+) 165 WP_269465405.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=710830 NNG64_RS01790 WP_269465405.1 345826..345990(+) (comS) [Bacillus siamensis strain WYJ-E14]
MRARRSSSLNRSGKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=710830 NNG64_RS01790 WP_269465405.1 345826..345990(+) (comS) [Bacillus siamensis strain WYJ-E14]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGGCAAGCGCCTCATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

60.87

85.185

0.519