Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NNG64_RS01760 Genome accession   NZ_CP101610
Coordinates   328772..329209 (-) Length   145 a.a.
NCBI ID   WP_060963635.1    Uniprot ID   A0AAI8N1S1
Organism   Bacillus siamensis strain WYJ-E14     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 323772..334209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NNG64_RS01730 (NNG64_01730) - 324572..325774 (+) 1203 WP_060963639.1 GTP-binding protein -
  NNG64_RS01735 (NNG64_01735) - 325838..326974 (+) 1137 WP_060965076.1 zinc-dependent alcohol dehydrogenase -
  NNG64_RS01740 (NNG64_01740) - 326991..327425 (+) 435 WP_060963638.1 RDD family protein -
  NNG64_RS01745 (NNG64_01745) - 327498..327821 (+) 324 WP_060963637.1 YckD family protein -
  NNG64_RS01750 (NNG64_01750) - 327922..328192 (+) 271 Protein_304 family 1 glycosylhydrolase -
  NNG64_RS01755 (NNG64_01755) nin/comJ 328352..328750 (-) 399 WP_047476185.1 competence protein ComJ Regulator
  NNG64_RS01760 (NNG64_01760) nucA/comI 328772..329209 (-) 438 WP_060963635.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NNG64_RS01765 (NNG64_01765) hxlB 329567..330124 (-) 558 WP_060963634.1 6-phospho-3-hexuloisomerase -
  NNG64_RS01770 (NNG64_01770) hxlA 330121..330756 (-) 636 WP_016936796.1 3-hexulose-6-phosphate synthase -
  NNG64_RS01775 (NNG64_01775) - 330989..331351 (+) 363 WP_060963633.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16082.39 Da        Isoelectric Point: 8.4850

>NTDB_id=710829 NNG64_RS01760 WP_060963635.1 328772..329209(-) (nucA/comI) [Bacillus siamensis strain WYJ-E14]
MKTLKALLLVLIIIAGAVAALIKGDIFSDNEQTVQKSDYDKVILFPSDRYPETAKHIKDAIKEGHPSICTIDRDGVHKRR
EQSLKHVPVKTGYDRDEWPMAVCKQGGNNASVEYISPADNRGAGSWVGHQLTNDPDGTRVLFKIK

Nucleotide


Download         Length: 438 bp        

>NTDB_id=710829 NNG64_RS01760 WP_060963635.1 328772..329209(-) (nucA/comI) [Bacillus siamensis strain WYJ-E14]
TTGAAAACATTAAAAGCACTGCTGCTTGTTCTTATCATCATTGCCGGAGCAGTTGCGGCCCTGATCAAGGGTGATATTTT
CTCAGATAACGAGCAGACCGTTCAGAAAAGCGATTACGACAAAGTAATCCTATTTCCGTCCGATCGATATCCGGAAACAG
CAAAGCATATTAAGGACGCGATAAAAGAAGGACATCCCAGCATATGCACCATTGACAGAGACGGAGTACATAAGCGGCGT
GAGCAATCTCTTAAACATGTGCCTGTAAAAACGGGGTACGACAGAGATGAATGGCCGATGGCGGTTTGTAAACAGGGCGG
AAACAATGCCTCCGTAGAATATATTTCTCCGGCAGACAACCGCGGGGCCGGCTCTTGGGTCGGACACCAGCTTACCAATG
ATCCAGATGGAACGAGAGTATTATTTAAAATCAAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

73.016

86.897

0.634