Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NMH04_RS07175 Genome accession   NZ_CP101609
Coordinates   1407884..1408465 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 47     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402884..1413465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMH04_RS07150 (NMH04_07125) - 1403546..1404724 (+) 1179 WP_193804259.1 N-acetyldiaminopimelate deacetylase -
  NMH04_RS07155 (NMH04_07130) - 1404775..1405017 (+) 243 WP_024424725.1 YkuS family protein -
  NMH04_RS07160 (NMH04_07135) - 1405042..1405851 (-) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  NMH04_RS07165 (NMH04_07140) ahpA 1406123..1406665 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NMH04_RS07170 (NMH04_07145) - 1406942..1407400 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NMH04_RS07175 (NMH04_07150) rok 1407884..1408465 (+) 582 WP_007498648.1 hypothetical protein Regulator
  NMH04_RS07180 (NMH04_07155) - 1408528..1409445 (-) 918 WP_058337401.1 hypothetical protein -
  NMH04_RS07185 (NMH04_07160) - 1409529..1410110 (+) 582 WP_188092750.1 molybdenum cofactor guanylyltransferase -
  NMH04_RS07190 (NMH04_07165) - 1410140..1411156 (+) 1017 WP_216895019.1 MoeB/ThiF family adenylyltransferase -
  NMH04_RS07195 (NMH04_07170) glp 1411166..1412440 (+) 1275 WP_255816998.1 gephyrin-like molybdotransferase Glp -
  NMH04_RS07200 (NMH04_07175) mobB 1412422..1412949 (+) 528 WP_045034297.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NMH04_RS07205 (NMH04_07180) - 1412942..1413433 (+) 492 WP_045034216.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=710786 NMH04_RS07175 WP_007498648.1 1407884..1408465(+) (rok) [Bacillus altitudinis strain 47]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=710786 NMH04_RS07175 WP_007498648.1 1407884..1408465(+) (rok) [Bacillus altitudinis strain 47]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782