Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NMH04_RS05785 Genome accession   NZ_CP101609
Coordinates   1155739..1156704 (+) Length   321 a.a.
NCBI ID   WP_056407964.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 47     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150739..1161704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMH04_RS05755 (NMH04_05745) argF 1151062..1152012 (+) 951 WP_047945536.1 ornithine carbamoyltransferase -
  NMH04_RS05760 (NMH04_05750) - 1152116..1152295 (+) 180 WP_008348517.1 YjzC family protein -
  NMH04_RS05765 (NMH04_05755) - 1152465..1153730 (+) 1266 WP_100324880.1 MFS transporter -
  NMH04_RS05770 (NMH04_05760) - 1153850..1154044 (-) 195 WP_008348514.1 YjzD family protein -
  NMH04_RS05775 (NMH04_05765) - 1154257..1154997 (+) 741 WP_007499048.1 hypothetical protein -
  NMH04_RS05780 (NMH04_05770) - 1155073..1155648 (+) 576 WP_039167361.1 hypothetical protein -
  NMH04_RS05785 (NMH04_05775) med 1155739..1156704 (+) 966 WP_056407964.1 BMP family ABC transporter substrate-binding protein Regulator
  NMH04_RS05790 (NMH04_05780) comZ 1156716..1156913 (+) 198 WP_008348507.1 ComZ family protein Regulator
  NMH04_RS05795 (NMH04_05785) - 1156924..1157157 (-) 234 WP_008348506.1 hypothetical protein -
  NMH04_RS05800 (NMH04_05790) - 1157327..1158265 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  NMH04_RS05805 (NMH04_05795) fabF 1158287..1159528 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  NMH04_RS05810 (NMH04_05800) - 1159606..1160400 (+) 795 WP_041507466.1 DUF2268 domain-containing protein -
  NMH04_RS05815 (NMH04_05805) - 1160571..1161551 (+) 981 WP_056407962.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35903.96 Da        Isoelectric Point: 6.1733

>NTDB_id=710776 NMH04_RS05785 WP_056407964.1 1155739..1156704(+) (med) [Bacillus altitudinis strain 47]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVKLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=710776 NMH04_RS05785 WP_056407964.1 1155739..1156704(+) (med) [Bacillus altitudinis strain 47]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAAACTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.968

97.819

0.636