Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NMH04_RS01795 Genome accession   NZ_CP101609
Coordinates   336913..337107 (-) Length   64 a.a.
NCBI ID   WP_255816846.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 47     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 331913..342107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMH04_RS01780 (NMH04_01780) - 332768..333566 (+) 799 Protein_315 transposase -
  NMH04_RS01785 (NMH04_01785) - 333612..334190 (-) 579 WP_152668730.1 hypothetical protein -
  NMH04_RS01790 (NMH04_01790) - 335424..336536 (+) 1113 WP_010890401.1 Rap family tetratricopeptide repeat protein -
  NMH04_RS01795 (NMH04_01795) nucA/comI 336913..337107 (-) 195 WP_255816846.1 hypothetical protein Machinery gene
  NMH04_RS01800 (NMH04_01800) - 337424..338281 (+) 858 WP_255816847.1 citryl-CoA lyase -
  NMH04_RS01805 (NMH04_01805) - 338278..339711 (+) 1434 WP_255816848.1 aldehyde dehydrogenase family protein -
  NMH04_RS01810 (NMH04_01810) aroD 339721..340494 (+) 774 WP_255816849.1 type I 3-dehydroquinate dehydratase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7447.48 Da        Isoelectric Point: 7.7819

>NTDB_id=710765 NMH04_RS01795 WP_255816846.1 336913..337107(-) (nucA/comI) [Bacillus altitudinis strain 47]
MKLKFPFDKYPETARDIKNAIKKGASAVCTIDKEGADKNGEESLKNIPTKREYDRDEFPFCWYV

Nucleotide


Download         Length: 195 bp        

>NTDB_id=710765 NMH04_RS01795 WP_255816846.1 336913..337107(-) (nucA/comI) [Bacillus altitudinis strain 47]
GTGAAATTGAAGTTTCCGTTTGATAAGTATCCAGAAACAGCACGAGACATAAAAAATGCTATAAAAAAGGGCGCTTCTGC
CGTCTGCACGATTGATAAAGAAGGTGCCGATAAAAATGGAGAAGAATCATTGAAAAACATACCAACAAAAAGGGAATATG
ATCGAGATGAATTCCCTTTTTGTTGGTATGTGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

55.932

92.188

0.516