Detailed information NTG0071067

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IF662_RS20635
• Genome accession: NZ_AP023427
• Coordinates: 4319060..4320085 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HUE1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4314060..4325085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IF662_RS20615 (RVB1_40400)	metJ	4315121..4315438 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
IF662_RS20620 (RVB1_40410)	yiiX	4315622..4316230 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
IF662_RS20625 (RVB1_40420)	rpmE	4316291..4316503 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
IF662_RS20630 (RVB1_40430)	priA	4316706..4318904 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
IF662_RS20635 (RVB1_40440)	cytR	4319060..4320085 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
IF662_RS20640 (RVB1_40450)	ftsN	4320177..4321136 (+)	960	WP_000068828.1	cell division protein FtsN	-
IF662_RS20645 (RVB1_40460)	hslV	4321229..4321759 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
IF662_RS20650 (RVB1_40470)	hslU	4321769..4323100 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
IF662_RS20655 (RVB1_40480)	menA	4323167..4324093 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IF662_RS20660 (RVB1_40490)	rraA	4324186..4324671 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IF662_RS20665 (RVB1_40500)	zapB	4324756..4325001 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=71067 IF662_RS20635 WP_000644904.1 4319060..4320085(+) (cytR) [Escherichia coli strain HUE1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=71067 IF662_RS20635 WP_000644904.1 4319060..4320085(+) (cytR) [Escherichia coli strain HUE1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628