Detailed information NTG0710363

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: BV189_RS04000
• Genome accession: NZ_CP116489
• Coordinates: 807447..809294 (+)
• Length: 615 a.a.
• NCBI ID: WP_012054612.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 93P28H1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 802447..814294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV189_RS03970 (BV189_0811)	yihI	803733..804293 (+)	561	WP_005648548.1	Der GTPase-activating protein YihI	-
BV189_RS03975 (BV189_0812)	-	804297..804737 (+)	441	WP_005648547.1	DUF2489 domain-containing protein	-
BV189_RS03980 (BV189_0813)	-	804799..805425 (-)	627	WP_005629869.1	response regulator	-
BV189_RS03985 (BV189_0814)	lysA	805631..806878 (-)	1248	WP_005685899.1	diaminopimelate decarboxylase	-
BV189_RS03990 (BV189_0815)	lptM	806926..807042 (-)	117	WP_005665069.1	LPS translocon maturation chaperone LptM	-
BV189_RS03995 (BV189_0816)	cyaY	807140..807445 (+)	306	WP_005685901.1	iron donor protein CyaY	-
BV189_RS04000 (BV189_0817)	recQ	807447..809294 (+)	1848	WP_012054612.1	DNA helicase RecQ	Machinery gene
BV189_RS04005 (BV189_0818)	proS	809390..811108 (+)	1719	WP_012054611.1	proline--tRNA ligase	-
BV189_RS04010 (BV189_0819)	lptD	811196..813544 (-)	2349	WP_105197710.1	LPS assembly protein LptD	-

Sequence

Protein

• Length: 615 a.a.
• Molecular weight: 69707.14 Da
• Isoelectric Point: 8.0094

>NTDB_id=710363 BV189_RS04000 WP_012054612.1 807447..809294(+) (recQ) [Haemophilus influenzae strain 93P28H1]
MQDSPLPSKIIEKPTALSVLKSVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL
MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHD
FRPEYTQLGGLKASFPDAPIMALTATADYATQQDILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGK
SGIIYCNSRNKVERITESLRNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSI
ESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEKPETPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPC
NNCDICLDPPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIVVLRGMHNQKIIELQHDKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNPTLQLTESAKVILKGEEELELAMPRISSISKIAHNPQRQGVANYDKDLFARLRFLRKQIADKENIPP
YIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGLPFIKLIQEHKAILANA

Nucleotide

• Length: 1848 bp

>NTDB_id=710363 BV189_RS04000 WP_012054612.1 807447..809294(+) (recQ) [Haemophilus influenzae strain 93P28H1]
ATGCAGGATTCTCCTTTACCATCAAAAATAATAGAAAAACCGACCGCACTTTCTGTTTTGAAATCGGTTTTTGGTTATCA
ATCTTTCCGTAAAGGGCAGGAAGAAGTCATTAATGCCACTTTAAATGGACAAGATGCGTTGGTGGTAATGGCAACGGGGA
ATGGTAAATCGCTTTGTTACCAAATTCCCGCACTTTGTTTTGATGGTTTAACGTTAGTGATTTCTCCGCTGATTTCCTTG
ATGAAAGATCAAGTGGATCAGCTGCAAGCTAATGGAATTGAGGCGGATTTTCTTAATTCTAGTCAGACTTTAGAACAGCA
GCAACAAGTACAAAATAAGCTTATTTCTGGGCAACTTAAACTACTTTATGTGTCGCCAGAAAAAGTGATGACGAACAGTT
TCTTTCAACTTATTTCTTATAGCAAAGTCTGCTTTATTGCGATTGATGAAGCGCATTGTATTTCTCAATGGGGGCATGAT
TTTCGCCCTGAATATACCCAGCTTGGTGGTTTAAAAGCCAGTTTCCCTGATGCGCCGATTATGGCACTTACGGCAACGGC
AGATTATGCGACTCAACAAGATATTCTGCGGCATCTTAATCTGAAAAATCTGCACAAATACATTGGTAGTTTTGATCGAC
CAAACATTCGTTATACCTTGGAAGAAAAATATAAACCAATGGAGCAATTGACACGTTTTGTGTTGGCTCAAAAGGGCAAG
AGTGGGATTATTTATTGCAACAGTCGAAACAAGGTTGAACGAATTACGGAAAGTTTACGCAATAAAGGTGTCTCTGCCGC
AGCTTATCACGCGGGAATGGAAACGGCACGGCGTGATCGTGTGCAACAGGATTTTCAGCGTGATAATGTGCAAGTAGTAG
TCGCAACCATTGCTTTTGGAATGGGGATTAATAAATCCAATGTGCGGTTTGTTGCCCATTTTGATTTGCCTCGTAGCATT
GAATCTTATTATCAAGAAACAGGTCGGGCAGGACGTGATGATTTACCTGCTGAGGCGGTTTTGTTTTATGAACCAGCGGA
TTACGCTTGGTTACAAAAAATTCTTTTAGAAAAACCAGAAACGCCACAGCGTCAGATTGAGCAGCATAAATTAGAAGCTA
TTGGAGAATTTGCAGAAAGCCAGACTTGTCGCCGTTTAGTTCTTCTCAATTATTTTGGTGAGCATCGACAAACACCATGC
AATAACTGTGATATATGCCTTGATCCTCCTAAAAAATATGATGGATTAGTCGATGCGCAAAAAGTAATGTCTACTATTTA
TCGAGTGGGGCAATGTTTCGGTGCGCATTATGTGATAGTGGTGTTGCGTGGAATGCATAATCAGAAAATTATTGAACTCC
AGCACGATAAACTTTCAGTGTATGGTATCGGAAAAGATAAAAGCAAAGAGCATTGGCAGTCTGTCATTCGTCAGCTTATT
CATTTGGGTTTTGTGCAACAGGTCATCAGTGAATTAAATCCAACGTTGCAGCTTACCGAAAGTGCGAAAGTGATTTTGAA
AGGCGAAGAAGAGTTAGAACTGGCAATGCCTCGTATTTCTTCAATCAGTAAAATTGCCCATAATCCACAACGTCAAGGTG
TTGCAAATTACGATAAGGATTTATTTGCACGCTTGCGTTTCTTACGCAAACAAATTGCCGATAAAGAAAATATTCCGCCA
TACATTGTCTTTAATGATGCGACGTTGCAAGAAATGGCACAATATATGCCAACAAGCAATATTGAAATGTTGCAAATTAA
TGGCGTGGGTTCAATTAAATTAGAACGCTTTGGGCTGCCTTTTATTAAACTTATTCAAGAACATAAGGCAATTTTGGCGA
ATGCGTAA

Domains

Predicted by InterProScan.

• HRDC domain (HRDC) (539-605)

• DEAD/DEAH box helicase (DEAD) (32-191)

• RecQ zinc-binding (RecQ_Zn_bind) (346-407)

• Helicase conserved C-terminal domain (Helicase_C) (228-332)

• RQC domain (RQC) (409-518)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.597	96.911	0.384