Detailed information NTG0710354

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BV189_RS02845
• Genome accession: NZ_CP116489
• Coordinates: 576366..577364 (+)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain 93P28H1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 571366..582364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV189_RS02820 (BV189_0576)	rbsD	571525..571944 (+)	420	WP_005664526.1	D-ribose pyranase	-
BV189_RS02825 (BV189_0577)	rbsA	571958..573439 (+)	1482	WP_011961660.1	ribose ABC transporter ATP-binding protein RbsA	-
BV189_RS02830 (BV189_0578)	rbsC	573455..574423 (+)	969	WP_005664522.1	ribose ABC transporter permease	-
BV189_RS02835 (BV189_0579)	rbsB	574443..575321 (+)	879	WP_011961659.1	ribose ABC transporter substrate-binding protein RbsB	-
BV189_RS02840 (BV189_0580)	rbsK	575419..576339 (+)	921	WP_005686990.1	ribokinase	-
BV189_RS02845 (BV189_0581)	cytR	576366..577364 (+)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
BV189_RS02850 (BV189_0582)	-	577471..578022 (+)	552	WP_005649445.1	TIGR00645 family protein	-
BV189_RS02855 (BV189_0583)	rraA	578157..578645 (-)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
BV189_RS02860 (BV189_0584)	menA	578697..579608 (-)	912	WP_005686994.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
BV189_RS02865 (BV189_0585)	tsaA	579670..580389 (+)	720	WP_005686995.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
BV189_RS02870 (BV189_0586)	tehA	580444..581388 (-)	945	WP_011961658.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=710354 BV189_RS02845 WP_005686992.1 576366..577364(+) (cytR) [Haemophilus influenzae strain 93P28H1]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=710354 BV189_RS02845 WP_005686992.1 576366..577364(+) (cytR) [Haemophilus influenzae strain 93P28H1]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361