Detailed information NTG0710306

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: E5Q65_RS15990
• Genome accession: NZ_CP116480
• Coordinates: 3298085..3299110 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GTEN_24
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3293085..3304110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5Q65_RS15960	zapB	3293169..3293414 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
E5Q65_RS15965	rraA	3293499..3293984 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
E5Q65_RS15970	menA	3294077..3295003 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
E5Q65_RS15975	hslU	3295070..3296401 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
E5Q65_RS15980	hslV	3296411..3296941 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
E5Q65_RS15985	ftsN	3297034..3297993 (-)	960	WP_000068834.1	cell division protein FtsN	-
E5Q65_RS15990	cytR	3298085..3299110 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
E5Q65_RS15995	priA	3299266..3301464 (-)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
E5Q65_RS16000	rpmE	3301667..3301879 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
E5Q65_RS16005	-	3301934..3302557 (-)	624	WP_001402674.1	TIGR02117 family protein	-
E5Q65_RS16010	yiiX	3302564..3303172 (-)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
E5Q65_RS16015	metJ	3303232..3303549 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=710306 E5Q65_RS15990 WP_000644904.1 3298085..3299110(-) (cytR) [Escherichia coli strain GTEN_24]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=710306 E5Q65_RS15990 WP_000644904.1 3298085..3299110(-) (cytR) [Escherichia coli strain GTEN_24]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628