Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NM966_RS11125 Genome accession   NZ_CP101506
Coordinates   2176868..2177671 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain B12     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2171868..2182671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM966_RS11110 (NM966_11065) - 2174084..2174320 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  NM966_RS11115 (NM966_11070) - 2174354..2175091 (-) 738 WP_046343944.1 glycerophosphodiester phosphodiesterase -
  NM966_RS11120 (NM966_11075) - 2175318..2176418 (-) 1101 WP_046343945.1 Rap family tetratricopeptide repeat protein -
  NM966_RS11125 (NM966_11080) spo0A 2176868..2177671 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NM966_RS11130 (NM966_11085) spoIVB 2177955..2179232 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  NM966_RS11135 (NM966_11090) recN 2179431..2181164 (-) 1734 WP_017367576.1 DNA repair protein RecN Machinery gene
  NM966_RS11140 (NM966_11095) argR 2181199..2181648 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  NM966_RS11145 (NM966_11100) - 2181810..2182664 (-) 855 WP_007501164.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=710297 NM966_RS11125 WP_008342226.1 2176868..2177671(-) (spo0A) [Bacillus altitudinis strain B12]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=710297 NM966_RS11125 WP_008342226.1 2176868..2177671(-) (spo0A) [Bacillus altitudinis strain B12]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTACTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTTGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884