Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NM966_RS06655 | Genome accession | NZ_CP101506 |
| Coordinates | 1302019..1304124 (-) | Length | 701 a.a. |
| NCBI ID | WP_074042069.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain B12 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1297019..1309124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NM966_RS06630 (NM966_06605) | - | 1297260..1297502 (+) | 243 | WP_008346101.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| NM966_RS06635 (NM966_06610) | - | 1297554..1299053 (-) | 1500 | WP_255392412.1 | ATP-binding protein | - |
| NM966_RS06640 (NM966_06615) | - | 1299258..1299713 (+) | 456 | WP_003211701.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NM966_RS06645 (NM966_06620) | motB | 1299900..1300667 (-) | 768 | WP_024719648.1 | flagellar motor protein MotB | - |
| NM966_RS06650 (NM966_06625) | motA | 1300660..1301454 (-) | 795 | WP_008346088.1 | flagellar motor stator protein MotA | - |
| NM966_RS06655 (NM966_06630) | clpC | 1302019..1304124 (-) | 2106 | WP_074042069.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| NM966_RS06660 (NM966_06635) | - | 1304370..1305413 (+) | 1044 | WP_048003074.1 | membrane protein | - |
| NM966_RS06665 (NM966_06640) | queC | 1305688..1306344 (+) | 657 | WP_008348090.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| NM966_RS06670 (NM966_06645) | queD | 1306345..1306785 (+) | 441 | WP_255392413.1 | 6-carboxytetrahydropterin synthase QueD | - |
| NM966_RS06675 (NM966_06650) | queE | 1306778..1307509 (+) | 732 | WP_019743916.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| NM966_RS06680 (NM966_06655) | queF | 1307525..1308022 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| NM966_RS06685 (NM966_06660) | - | 1308486..1308704 (+) | 219 | WP_017367128.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 701 a.a. Molecular weight: 78178.89 Da Isoelectric Point: 5.2973
>NTDB_id=710287 NM966_RS06655 WP_074042069.1 1302019..1304124(-) (clpC) [Bacillus altitudinis strain B12]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPNLFGGGSFFSEQAGHATSQERPKQKGLLDELGRN
LTDGAHAGLIDPVIGRDEEVTRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIANGDVPNKLKNKQVYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVMVDEPTQDEAFEILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALNEERYEKAAKLRDEEEAIEARLQNKTNVKEHVVTAEDIQSIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSKEAIIRLDMSEYME
KHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSTDKKAVKVGFQSEQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDKDDLVKIVDLLLKDLSEQLKEQNLTVHV
TNEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTDILLEEEKLTGFTVDVEHDEIVVKKS
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPNLFGGGSFFSEQAGHATSQERPKQKGLLDELGRN
LTDGAHAGLIDPVIGRDEEVTRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIANGDVPNKLKNKQVYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVMVDEPTQDEAFEILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALNEERYEKAAKLRDEEEAIEARLQNKTNVKEHVVTAEDIQSIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSKEAIIRLDMSEYME
KHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSTDKKAVKVGFQSEQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDKDDLVKIVDLLLKDLSEQLKEQNLTVHV
TNEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTDILLEEEKLTGFTVDVEHDEIVVKKS
Nucleotide
Download Length: 2106 bp
>NTDB_id=710287 NM966_RS06655 WP_074042069.1 1302019..1304124(-) (clpC) [Bacillus altitudinis strain B12]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACGATTCGCCTGAATATGCAAGTAAATTCGTCCCGTAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAACAGTCAAAAATGAAAATGGGTCCTAACCTTTTCGGAGGCGGTTCAT
TCTTCTCTGAGCAAGCAGGACATGCGACGAGCCAAGAGCGGCCTAAACAAAAAGGCTTACTCGATGAGCTTGGCCGGAAC
TTAACGGATGGCGCACATGCTGGTTTAATCGATCCTGTCATTGGCCGTGATGAAGAAGTCACAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCTGGTGTTGGTAAAACGGCCATAGCCGAAGGACTAGCAC
TAAAAATTGCAAATGGAGATGTACCAAATAAATTAAAGAACAAACAAGTTTATTTATTAGATGTCTCTTCACTTGTGGCA
AACACAGGTGTACGTGGTCAATTTGAGGAACGGATGAAGCAATTAATCAAAGAATTGCAAAGCCGTAAAAATATCATCTT
ATTCGTTGATGAAATTCATCTTCTTGTAGGCGCAGGCTCTGCCGAAGGGTCAATGGATGCCGGAAACATTTTGAAACCAG
CTCTAGCTCGAGGGGAACTGCAGCTAGTAGGTGCGACAACATTAAAAGAGTATCGTCAAATTGAAAAAGATGCTGCCCTT
GAACGCAGGTTCCAGCCCGTCATGGTTGATGAGCCAACACAGGATGAAGCATTCGAGATATTAAAAGGCATTCAAGATAA
GTATGAAGCCTATCATGGCGTCACCTATTCTGACGAAGCCATTAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGCCACTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAATTAACAAACCGTCTTGCGCAAATCGCCGCTGAAAAACAAGCTGCTTTAAATGAAGAACGATATGAAAAAGC
AGCGAAGCTTCGAGACGAAGAAGAAGCGATTGAAGCGAGATTGCAAAACAAAACAAATGTCAAAGAACATGTCGTCACAG
CTGAGGACATTCAGTCGATTGTAGAACAAAAAACAGGTATCCCTGTCGGCAAACTGCAAGCAGACGAACAAACAAAAATG
AAAGAAATTGATGTCCGCTTAAAAGCCCGCGTCATTGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCCGTAAAAAG
AAGCAGAGCCGGCTTAAAATCAAAACATAGACCAACTGGCTCCTTCCTTTTCGTTGGGCCAACAGGCGTCGGGAAAACCG
AATTGTCTAAAACATTAGCGGAAGAATTATTTGGCTCAAAAGAAGCGATCATTCGTTTAGATATGAGTGAGTACATGGAG
AAACATTCCGTGTCCAAAATCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCCGGACAGCTCACGGAAAAGGT
TCGCAGAAAACCATACAGCATCATTTTGCTCGATGAAATCGAAAAAGCGCACCCTGATGTCCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGTCTAACAGACAGTCAAGGCAGAACCGTCAGCTTTAAAGACACAGTTATCATTATGACAAGTAAC
GCTGGCAGCACAGATAAAAAAGCAGTCAAAGTCGGATTCCAGTCTGAACAAGAAGAAGCCATCGAAGAACAATCATTGAT
TGATTCACTGAGCGCTTATTTCAAACCGGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGATAAAG
ACGATTTAGTCAAAATTGTGGATCTTCTGCTCAAAGATTTGTCAGAGCAGTTAAAAGAACAAAATCTAACTGTTCACGTC
ACAAACGAAGCGAAAGAAAAAATCGCTGAACTTGGTTACCATCCAGCATTTGGGGCTCGTCCGTTACGAAGAACGATTCA
AGAGCATGTTGAAGATCAAATGACGGACATCTTGCTTGAAGAAGAAAAACTTACTGGATTTACAGTCGATGTTGAACATG
ACGAAATTGTTGTGAAAAAGAGCTAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACGATTCGCCTGAATATGCAAGTAAATTCGTCCCGTAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAACAGTCAAAAATGAAAATGGGTCCTAACCTTTTCGGAGGCGGTTCAT
TCTTCTCTGAGCAAGCAGGACATGCGACGAGCCAAGAGCGGCCTAAACAAAAAGGCTTACTCGATGAGCTTGGCCGGAAC
TTAACGGATGGCGCACATGCTGGTTTAATCGATCCTGTCATTGGCCGTGATGAAGAAGTCACAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCTGGTGTTGGTAAAACGGCCATAGCCGAAGGACTAGCAC
TAAAAATTGCAAATGGAGATGTACCAAATAAATTAAAGAACAAACAAGTTTATTTATTAGATGTCTCTTCACTTGTGGCA
AACACAGGTGTACGTGGTCAATTTGAGGAACGGATGAAGCAATTAATCAAAGAATTGCAAAGCCGTAAAAATATCATCTT
ATTCGTTGATGAAATTCATCTTCTTGTAGGCGCAGGCTCTGCCGAAGGGTCAATGGATGCCGGAAACATTTTGAAACCAG
CTCTAGCTCGAGGGGAACTGCAGCTAGTAGGTGCGACAACATTAAAAGAGTATCGTCAAATTGAAAAAGATGCTGCCCTT
GAACGCAGGTTCCAGCCCGTCATGGTTGATGAGCCAACACAGGATGAAGCATTCGAGATATTAAAAGGCATTCAAGATAA
GTATGAAGCCTATCATGGCGTCACCTATTCTGACGAAGCCATTAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGCCACTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAATTAACAAACCGTCTTGCGCAAATCGCCGCTGAAAAACAAGCTGCTTTAAATGAAGAACGATATGAAAAAGC
AGCGAAGCTTCGAGACGAAGAAGAAGCGATTGAAGCGAGATTGCAAAACAAAACAAATGTCAAAGAACATGTCGTCACAG
CTGAGGACATTCAGTCGATTGTAGAACAAAAAACAGGTATCCCTGTCGGCAAACTGCAAGCAGACGAACAAACAAAAATG
AAAGAAATTGATGTCCGCTTAAAAGCCCGCGTCATTGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCCGTAAAAAG
AAGCAGAGCCGGCTTAAAATCAAAACATAGACCAACTGGCTCCTTCCTTTTCGTTGGGCCAACAGGCGTCGGGAAAACCG
AATTGTCTAAAACATTAGCGGAAGAATTATTTGGCTCAAAAGAAGCGATCATTCGTTTAGATATGAGTGAGTACATGGAG
AAACATTCCGTGTCCAAAATCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCCGGACAGCTCACGGAAAAGGT
TCGCAGAAAACCATACAGCATCATTTTGCTCGATGAAATCGAAAAAGCGCACCCTGATGTCCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGTCTAACAGACAGTCAAGGCAGAACCGTCAGCTTTAAAGACACAGTTATCATTATGACAAGTAAC
GCTGGCAGCACAGATAAAAAAGCAGTCAAAGTCGGATTCCAGTCTGAACAAGAAGAAGCCATCGAAGAACAATCATTGAT
TGATTCACTGAGCGCTTATTTCAAACCGGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGATAAAG
ACGATTTAGTCAAAATTGTGGATCTTCTGCTCAAAGATTTGTCAGAGCAGTTAAAAGAACAAAATCTAACTGTTCACGTC
ACAAACGAAGCGAAAGAAAAAATCGCTGAACTTGGTTACCATCCAGCATTTGGGGCTCGTCCGTTACGAAGAACGATTCA
AGAGCATGTTGAAGATCAAATGACGGACATCTTGCTTGAAGAAGAAAAACTTACTGGATTTACAGTCGATGTTGAACATG
ACGAAATTGTTGTGAAAAAGAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.969 |
100 |
0.601 |
| clpE | Streptococcus mutans UA159 |
57.241 |
100 |
0.592 |
| clpE | Streptococcus pneumoniae Rx1 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae D39 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae R6 |
55.846 |
100 |
0.579 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.846 |
100 |
0.579 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.949 |
95.72 |
0.516 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.244 |
90.585 |
0.428 |
| clpC | Streptococcus thermophilus LMD-9 |
44.427 |
92.154 |
0.409 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.272 |
92.154 |
0.408 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.637 |
90.442 |
0.404 |
| clpC | Streptococcus pneumoniae Rx1 |
44.833 |
89.729 |
0.402 |
| clpC | Streptococcus pneumoniae D39 |
44.833 |
89.729 |
0.402 |
| clpC | Streptococcus mutans UA159 |
44.444 |
89.872 |
0.399 |