Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NM966_RS05650 Genome accession   NZ_CP101506
Coordinates   1119495..1119692 (+) Length   65 a.a.
NCBI ID   WP_017367008.1    Uniprot ID   -
Organism   Bacillus altitudinis strain B12     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1114495..1124692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM966_RS05620 (NM966_05610) - 1114895..1115074 (+) 180 WP_008348517.1 YjzC family protein -
  NM966_RS05625 (NM966_05615) - 1115244..1116509 (+) 1266 WP_236810374.1 MFS transporter -
  NM966_RS05630 (NM966_05620) - 1116629..1116823 (-) 195 WP_008348514.1 YjzD family protein -
  NM966_RS05635 (NM966_05625) - 1117036..1117776 (+) 741 WP_007499048.1 hypothetical protein -
  NM966_RS05640 (NM966_05630) - 1117852..1118427 (+) 576 WP_017367007.1 hypothetical protein -
  NM966_RS05645 (NM966_05635) med 1118518..1119483 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  NM966_RS05650 (NM966_05640) comZ 1119495..1119692 (+) 198 WP_017367008.1 ComZ family protein Regulator
  NM966_RS05655 (NM966_05645) - 1119896..1120129 (-) 234 WP_046343174.1 hypothetical protein -
  NM966_RS05660 (NM966_05650) - 1120299..1121237 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  NM966_RS05665 (NM966_05655) fabF 1121259..1122500 (+) 1242 WP_191218898.1 beta-ketoacyl-ACP synthase II -
  NM966_RS05670 (NM966_05660) - 1122578..1123372 (+) 795 WP_017360172.1 DUF2268 domain-containing protein -
  NM966_RS05675 (NM966_05665) - 1123543..1124523 (+) 981 WP_035392443.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7346.42 Da        Isoelectric Point: 4.3178

>NTDB_id=710281 NM966_RS05650 WP_017367008.1 1119495..1119692(+) (comZ) [Bacillus altitudinis strain B12]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQVLQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=710281 NM966_RS05650 WP_017367008.1 1119495..1119692(+) (comZ) [Bacillus altitudinis strain B12]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGTACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.852

93.846

0.646